Can be used to carry out permutation based gene expression pathway analysis. This work was supported by a National Institute of Allergy and Infectious Disease/National Institutes of Health contract (No. HHSN272200900059C).
| Version: | 1.1 |
| Depends: | R (≥ 3.4.0), R2HTML (≥ 2.3.2), xtable (≥ 1.8-2) |
| Suggests: | knitr |
| Published: | 2017-06-09 |
| Author: | Ivo D. Shterev [aut, cre], Kouros Owzar [aut], Gregory D. Sempowski [aut], Kenneth Wilder [ctb, cph] (wrote original version of ranker.h) |
| Maintainer: | Ivo D. Shterev <i.shterev at duke.edu> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| CRAN checks: | permPATH results |
| Reference manual: | permPATH.pdf |
| Vignettes: |
permPATH manual |
| Package source: | permPATH_1.1.tar.gz |
| Windows binaries: | r-devel: permPATH_1.1.zip, r-release: permPATH_1.1.zip, r-oldrel: permPATH_1.1.zip |
| OS X binaries: | r-release: permPATH_1.1.tgz, r-oldrel: permPATH_1.1.tgz |
| Old sources: | permPATH archive |
Please use the canonical form https://CRAN.R-project.org/package=permPATH to link to this page.


View all API methods.
View all client properties.
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Client property name |
SubstanceLookAndFeel.COLORIZATION_FACTOR |
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Description |
Client property name for specifying the colorization amount applied to
the background and foreground of the current color scheme and the
specific control. By default, when the application does not use any
custom colors, all the controls are painted with the colors of the
current theme / skin. The colors coming from the look-and-feel implement
the marker This new client property installs the "smart colorization" mode which uses the colors of the current color scheme and the custom background / foreground colors (when installed by application) to colorize the relevant portions of the control. For example, on checkbox the custom background color will be used to colorize the check box itself, while the custom foreground color will be applied to the check box text and the check mark. The value of this property specifies the actual colorization amount. Value of 0.0 results in Substance completely ignoring the custom application background and foreground colors set on the components - no colorization. Values closer to 1.0 result in almost full usage of the custom application background and foreground colors set on the components. Note that in order to maintain the gradients (fill, border, etc), even value of 1.0 does not result in full custom color being applied to the relevant visuals of the control.
This property can be specified globally on
The default colorization amount (when this property is not set at all) is 0.5. This means that applications that install custom background / foreground colors on their UI controls will see them colorized with 50% "strength", even without setting this property.
The value should be an instance of Note that components in decoration areas registered on the current skin will ignore the colorization on custom background color. The background of such components is always painted by the skin's decoration painter to ensure consistent background painting of the relevant decoration area. |
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See also |
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Sample code |
The screenshot below shows application frame with a button, a checkbox
and a radio button. All three have custom (non- The same application with this client property set to 1.0 on the panel that contains these three controls. Note how the colorization preserves the fill gradients: The same application with this client property set to 0.25 on the panel that contains these three controls. |
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When people talk about true love generally you think of a ‘happily ever after’ story, where the prince and princess ride off into the sunset. I think that’s bullshit, real life isn’t that easy in my experience. True love to me is the following.

- Finding someone that will give you another perspective in life.
- Finding someone who can surface feelings of love that you never knew existed.
- Finding someone you can look at every day and say ‘I can’t possibly imagine my life without them'.
- Finding someone that will make you whole.
We’ve been together 9 years now and I can look back and say that I am a significantly better person than I was before I met you. The amount of love that I feel daily is far more than at any other point in my life.  I know I don’t express my feelings all the time, but you need to know that I love you now more than ever. Diamonds are made by extreme pressure, this is how I think of our relationship. We’ve been forged in the fire of life, and our bond is stronger than the Blizzard algo that keeps you in Bronze (that’s strong!).
Just looking back at the ride we’ve had together bring tears to my eyes. Looking at our babies and our family I just can’t believe how lucky I am to have this life, a life that would not be possible without you baby. To me, our life is what defines what true love really is. Sure we fight sometimes, and we’ve been through some really tough times, but this shared journey through hardship is what makes us strong.
I am the luckiest guy in the world, actually in all the Universe. One day when we're old we can sit down and write a story about our life together. We will sell that story to a movie producer that will make the next generation "Notebook" (Laughing), and we'll make billions. Back to reality, I would never sell out our love by the way... I never imagined that I would end up with someone like you baybay.


Undocumented
| Class | BBOBBiObjDataFormat |
Undocumented |
| Class | BBOBNewDataFormat |
the new data format assumes constraints evaluations as second column |
| Class | BBOBOldDataFormat |
Undocumented |
| Class | DataFormat |
serves to define and manage the interfacing between written logger data and the contents of DataSet . |
| Variable | current_data_format |
Undocumented |
| Variable | data_format_name_to_class_mapping |
Undocumented |


ongoing - last for years
important and big changes
best minds of the community
"officially" announced
a lot of "side" activities
(blog posts, mentoring, ...)
everyone is watching the progress
years of work
need for structure
complex systems
hard to understand
important for the future of the project
access to
experienced contrbutors
and outside experts
need for
coordination
"easier" funding
~ 1.002.990€
*Based on the exchange rate on Feb 18th at 10:39:49 UTC.* we're still relying too much on it
Examiner.com, MD Systems, Somedia, Gassmann Media, Ringier, Acquia, NYC Camp, Hubert Burda Media, Ueberbit, ...


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|
geopm
|
#include <SSTIO.hpp>
Public Member Functions | |
| virtual int | add_mbox_read (uint32_t cpu_index, uint16_t command, uint16_t subcommand, uint32_t subcommand_arg)=0 |
| Interact with the mailbox on commands that are expected to return data. More... | |
| virtual int | add_mbox_write (uint32_t cpu_index, uint16_t command, uint16_t subcommand, uint32_t interface_parameter, uint16_t read_subcommand, uint32_t read_interface_parameter, uint32_t read_mask)=0 |
| Interact with the mailbox on commands that are not expected to return data. More... | |
| virtual int | add_mmio_read (uint32_t cpu_index, uint16_t register_offset)=0 |
| Interact with the mmio interface on commands that are expected to return data. More... | |
| virtual int | add_mmio_write (uint32_t cpu_index, uint16_t register_offset, uint32_t register_value, uint32_t read_mask)=0 |
| Interact with the mmio interface on commands that are not expected to return data. More... | |
| virtual void | read_batch (void)=0 |
| Issue a batch read. More... | |
| virtual uint64_t | sample (int batch_idx) const =0 |
| Sample a value from the most recent batch read. More... | |
| virtual void | write_batch (void)=0 |
| Issue a batch write. More... | |
| virtual uint32_t | read_mbox_once (uint32_t cpu_index, uint16_t command, uint16_t subcommand, uint32_t subcommand_arg)=0 |
| Immediately query the SST mailbox for a read operation. More... | |
| virtual void | write_mbox_once (uint32_t cpu_index, uint16_t command, uint16_t subcommand, uint32_t interface_parameter, uint16_t read_subcommand, uint32_t read_interface_parameter, uint32_t read_mask, uint64_t write_value, uint64_t write_mask)=0 |
| Immediately query the SST mailbox for a write operation. More... | |
| virtual uint32_t | read_mmio_once (uint32_t cpu_index, uint16_t register_offset)=0 |
| Immediately read a value from the SST MMIO interface. More... | |
| virtual void | write_mmio_once (uint32_t cpu_index, uint16_t register_offset, uint32_t register_value, uint32_t read_mask, uint64_t write_value, uint64_t write_mask)=0 |
| Immediately write a value to the SST MMIO interface. More... | |
| virtual void | adjust (int batch_idx, uint64_t write_value, uint64_t write_mask)=0 |
| Adjust a value for the next batch write. More... | |
| virtual uint32_t | get_punit_from_cpu (uint32_t cpu_index)=0 |
| Get the punit index assocaited with a CPU index. More... | |
Static Public Member Functions | |
| static std::shared_ptr< SSTIO > | make_shared (uint32_t max_cpus) |
| Create an SSTIO object. More... | |
|
pure virtual |
Interact with the mailbox on commands that are expected to return data.
| [in] | cpu_index | Index of the cpu to which the mailbox read is being issued |
| [in] | command | Which SST mailbox command to issue |
| [in] | subcommand | Which SST mailbox subcommand to issue |
| [in] | subcommand_arg | Which argument to use for the SST mailbox subcommand |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Interact with the mailbox on commands that are not expected to return data.
| [in] | cpu_index | Index of the cpu to which the mailbox read is being issued |
| [in] | command | Which SST mailbox command to issue |
| [in] | subcommand | Which SST mailbox subcommand to issue |
| [in] | interface_parameter | Which SST mailbox parameter to use |
| [in] | read_subcommand | Which SST mailbox subcommand to issue when reading the current value prior to a write |
| [in] | read_interface_parameter | Which SST mailbox parameter to use when reading the current value prior to a write |
| [in] | read_mask | The mask to apply to values read from the mailbox prior to a write |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Interact with the mmio interface on commands that are expected to return data.
| [in] | cpu_index | Index of the cpu to which the MMIO read is being issued |
| [in] | register_offset | Which SST MMIO register offset to use |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Interact with the mmio interface on commands that are not expected to return data.
| [in] | cpu_index | Index of the cpu to which the MMIO write is being issued |
| [in] | register_offset | Which SST MMIO register offset to use |
| [in] | register_value | Which SST MMIO register value to set for the write. |
| [in] | read_mask | The mask to apply to values read from the register prior to a write |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Adjust a value for the next batch write.
| [in] | batch_idx | An index returned from an add_*_write function |
| [in] | write_value | The value to write in the next batch_write() |
| [in] | write_mask | The mask to apply when writing this value |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Get the punit index assocaited with a CPU index.
| [in] | cpu_index | Index of the CPU |
Implemented in geopm::SSTIOImp.
|
static |
Create an SSTIO object.
| [in] | max_cpus | The number of CPUs to attempt to map to punit cores. |
|
pure virtual |
Issue a batch read.
Implemented in geopm::SSTIOImp.
|
pure virtual |
Immediately query the SST mailbox for a read operation.
| [in] | cpu_index | Index of the cpu to which the mailbox read is being issued |
| [in] | command | Which SST mailbox command to issue |
| [in] | subcommand | Which SST mailbox subcommand to issue |
| [in] | subcommand_arg | Which argument to use for the SST mailbox subcommand |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Immediately read a value from the SST MMIO interface.
| [in] | cpu_index | Index of the cpu to which the MMIO read is being issued |
| [in] | register_offset | Which SST MMIO register offset to use |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Sample a value from the most recent batch read.
| [in] | batch_idx | An index returned from an add_*_read function prior to calling read_batch(). |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Issue a batch write.
Implemented in geopm::SSTIOImp.
|
pure virtual |
Immediately query the SST mailbox for a write operation.
| [in] | cpu_index | Index of the cpu to which the mailbox read is being issued |
| [in] | command | Which SST mailbox command to issue |
| [in] | subcommand | Which SST mailbox subcommand to issue |
| [in] | interface_parameter | Which SST mailbox parameter to use |
| [in] | read_subcommand | Which SST mailbox subcommand to issue when reading the current value prior to a write |
| [in] | read_interface_parameter | Which SST mailbox parameter to use when reading the current value prior to a write |
| [in] | read_mask | The mask to apply to values read from the mailbox prior to a write |
| [in] | write_value | The value to write |
| [in] | write_mask | The mask to apply to the written value |
Implemented in geopm::SSTIOImp.
|
pure virtual |
Immediately write a value to the SST MMIO interface.
| [in] | cpu_index | Index of the cpu to which the MMIO write is being issued |
| [in] | register_offset | Which SST MMIO register offset to use |
| [in] | register_value | Which SST MMIO register value to set for the write. |
| [in] | read_mask | The mask to apply to values read from the register prior to a write |
| [in] | write_value | The value to write |
| [in] | write_mask | The mask to apply to the written value |
Implemented in geopm::SSTIOImp.


| File | Statements | Branches | Functions | Lines | |||||
|---|---|---|---|---|---|---|---|---|---|
| index.js | 100% | 5/5 | 100% | 0/0 | 100% | 0/0 | 100% | 5/5 | |
| message.js | 76.09% | 35/46 | 57.89% | 11/19 | 70% | 7/10 | 76.09% | 35/46 | |
| reply.js | 84.72% | 61/72 | 63.33% | 19/30 | 100% | 16/16 | 84.72% | 61/72 | |
| topic.js | 86.27% | 88/102 | 64.29% | 18/28 | 100% | 23/23 | 86.27% | 88/102 | |
| topic_collect.js | 100% | 15/15 | 100% | 0/0 | 100% | 4/4 | 100% | 15/15 | |
| user.js | 94.59% | 35/37 | 75% | 6/8 | 80% | 8/10 | 94.59% | 35/37 |


Network
Not connected
Wallet
Address:
RLC wallet:
Native wallet:
Amount
BRIDGE TO MAINCHAIN
Amount
BRIDGE TO SIDECHAIN
Account
User account:
Amount
DEPOSIT
Amount
WITHDRAW
Storage
Status:
INIT REMOTE STORAGE
Secrets
Secret name
CHECK REQUESTER SECRET
Secret name
Secret value
PUSH REQUESTER SECRET
Apps
App address
SHOW APP
Buy computation
App address
Category
App params
BUY COMPUTATION
Previous deals
SHOW PREVIOUS DEALS
Dealid
SHOW DEAL
Taskid
SHOW TASK
Taskid
DOWNLOAD TASK RESULT
Datasets
COUNT USER DATASETS
Dataset index
SHOW USER DATASET
Dataset address
SHOW DATASET
Prepare encrypted dataset
GENERATE DATASET KEY
Encryption key
Dataset file
ENCRYPT AND UPLOAD DATASET
Deploy dataset
Dataset name
Dataset url/ipfs
Dataset checksum
DEPLOY DATASET
Push encryption key to the SMS
Encryption key
Dataset address
PUSH SECRET
Decrypt results
beneficiary key
encrypted result
DECRYPT


Over the course of three years, I developed a respiratory model for Etiometry Inc to be used as their second real-time patient risk index. The model is comprised of multiple dynamic equations that help track the flow of oxygen and carbon dioxide throughout the body. The model was then used along with a probalistic engine that combined real-time measurements to find the maximum likliehood of various states. Doing so, we are able to track many unmeasureable states and accurately track blood gases of a patient before a blood gas. The index was a likelihood estimation of how underventilated a mechanically-ventilated patient was based on the estimated oxygen and carbon dioxide levels. Really cool stuff, check out Etiometry. Along with model/algorithm development, I trained doctors, nurses and, respiratory therapists how to use the product.
Intrigued by the use cases of blockchain technologies and what they can offer I began develop a personal project that allows graphic designers and digital artists to sell their digital artwork in a limited quantity. Blockchain technology has allowed for the creation of digitally rare items. Bitcoin a clear example and cryptopunks an example in tradeable rare artwork on the blockchain. This project will allow any artists to submit artwork and select how many will be produced and sold. This would allow the a digital artist to sell artwork as if it was a painting on a canvas.
Been developing static websites for friends and family since early 2017. I have done contracted work but do not actively look for clients. Have developed experience in html, css, and javascript. Check out my sites (including this one)!
Prototyped a sensory subsitution device for the visually impaired that would detect dropoffs and hanging objects undetectable with a white cane. Received 2nd place for NIH DEBUT National competition.


Looks Like Hulu Now Has More Live TV Subscribers Than Sling TV
Based on the number of subscribers, analysts are now predicting that Hulu has overtaken Sling TV.
At the very least, the two are neck and neck with both understood to be hovering around 2.7 million subscribers each.
The fourth quarter is now likely to prove pivotal in deciding which service ends 2019 with the most subscribers.
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Hulu gains continue to outpace everyone
Compared to Sling TV, Hulu + Live TV is a much newer considering the service launched in early 2017.
However, in the short space of time between then and now it has risen up the subscriber ranks.
Hulu does not provide firm details on live TV subscribers, but industry predictions have continuously pointed to Hulu + Live TV as closing in on Sling TV.
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The latest predictions come from MoffettNathanson's "Q3 2019 Cord-Cutting Monitor: Live Is Dead" report.
In the report, MoffettNathanson suggests Hulu picked up almost 400K subscribers in the third quarter, bringing its total to just over 2.7 million.
In contrast to Hulu, Dish Network routinely releases firm numbers and had already confirmed Sling TV had 2.69 million subscribers at the end of the third quarter.
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If the MoffettNathanson figures are correct, it would appear that Hulu has now overtaken Sling TV, albeit only just.
Q4 now pivotal to the subscriber race
Closing out 2019 as the service with the most live TV subscribers is now likely to come down to the fourth quarter.
With both services understood to be hovering around 2.7 million subs, the service that picks up the most in the closing months of the year will end the year as the service with the most subscribers.
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While the momentum is with Hulu, Sling TV had a very good third quarter.
Up until the third quarter, Sling TV appeared to have hit a wall. It did see some growth, but the growth was minimal in the first half of the year. For example, Sling TV started 2019 with 2.4 million subs and ended the second quarter with 2.4 million subs.
In the third quarter alone, Sling TV picked up more than 200,000 subscribers.
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Adding to the drama will be PlayStation Vue
Sony recently confirmed the PlayStation Vue service will close in January. As a result, the fourth quarter is likely to be exactly when current PlayStation Vue subscribers are shopping for an alternative.
With both services offering access at lower than average prices, and AT&T TV NOW continuing to lose subscribers, either Hulu or Sling is likely to be the destination for those PlayStation Vue switchers.
That's if they don't head to YouTube TV instead. As YouTube TV was also predicted as having done well during the same quarter.
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MoffettNathanson points to YouTube TV now firmly in third place with 1.6 million subs.


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{% extends "base.html" %} {% import 'bootstrap/wtf.html' as wtf %} {% block app_content %}
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