| transferase activity, transferring nitrogenous groups |
| transferase activity, transferring one-carbon groups |
| transferase activity, transferring pentosyl groups |
| transferase activity, transferring phosphorus-containing groups |
| transferase activity, transferring selenium-containing groups |
| transferase activity, transferring sulfur-containing groups |
| transferase complex |
| transferase complex, transferring phosphorus-containing groups |
| transferrin receptor activity |
| transferrin receptor binding |
| transferrin transmembrane transporter activity |
| transferrin transport |
| trans-feruloyl-CoA hydratase activity |
| trans-feruloyl-CoA synthase activity |
| transformation of host cell by virus |
| transformed cell apoptotic process |
| transforming growth factor beta activated kinase 1 complex |
| transforming growth factor beta activation |
| transforming growth factor beta binding |
| transforming growth factor beta production |
| transforming growth factor beta receptor activity, type I |
| transforming growth factor beta receptor activity, type II |
| transforming growth factor beta receptor activity, type III |
| transforming growth factor beta receptor binding |
| transforming growth factor beta receptor complex assembly |
| transforming growth factor beta receptor homodimeric complex |
| transforming growth factor beta receptor signaling pathway |
| transforming growth factor beta receptor signaling pathway involved in axial mesodermal cell fate specification |
| transforming growth factor beta receptor signaling pathway involved in determination of left/right asymmetry |
| transforming growth factor beta receptor signaling pathway involved in endodermal cell fate specification |
| transforming growth factor beta receptor signaling pathway involved in heart jogging |
| transforming growth factor beta receptor signaling pathway involved in mesodermal cell fate specification |
| transforming growth factor beta receptor signaling pathway involved in neural plate anterior/posterior pattern formation |
| transforming growth factor beta receptor signaling pathway involved in primary germ layer cell fate commitment |
| transforming growth factor beta receptor signaling pathway involved in primitive streak formation |
| transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth |
| transforming growth factor beta receptor, common-partner cytoplasmic mediator activity |
| transforming growth factor beta receptor, cytoplasmic mediator activity |
| transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity |
| transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity |
| transforming growth factor beta type I receptor homodimeric complex |
| transforming growth factor beta type II receptor homodimeric complex |
| transforming growth factor beta1 activation |
| transforming growth factor beta1 production |
| transforming growth factor beta1-type II receptor complex |
| transforming growth factor beta1-type II receptor-type I receptor complex |
| transforming growth factor beta2 activation |
| transforming growth factor beta2 production |
| transforming growth factor beta3 activation |
| transforming growth factor beta3 production |
| transforming growth factor beta-activated receptor activity |
| transforming growth factor receptor beta signaling pathway involved in oral/aboral axis specification |
| transforming growth factor-beta secretion |
| trans-geranyl-CoA isomerase activity |
| trans-Golgi network |
| trans-Golgi network membrane |
| trans-Golgi network membrane organization |
| trans-Golgi network to recycling endosome transport |
| trans-Golgi network transport vesicle |
| trans-Golgi network transport vesicle lumen |
| trans-Golgi network transport vesicle membrane |
| trans-Golgi-derived vesicle fusion with Golgi medial cisterna membrane |
| trans-hexaprenyltranstransferase activity |
| transition between fast and slow fiber |
| transition between slow and fast fiber |
| transition metal ion binding |
| transition metal ion homeostasis |
| transition metal ion transmembrane transporter activity |
| transition metal ion transport |
| transition phyllode leaf |
| transition vascular leaf |
| transition zone |
| transitional endoplasmic reticulum polarization at cell division site |
| transitional one stage B cell differentiation |
| transitional stage B cell differentiation |
| transitional two stage B cell differentiation |
| transitive RNA interference |
| transketolase activity |
| trans-L-3-hydroxyproline dehydratase activity |
| translation |
| translation activator activity |
| translation elongation factor activity |
| translation factor activity, non-nucleic acid binding |
| translation factor activity, RNA binding |
| translation initiation complex |
| translation initiation factor activity |
| translation initiation factor binding |
| translation initiation ternary complex |
| translation preinitiation complex |
| translation regulator activity |
| translation regulator activity, nucleic acid binding |
| translation reinitiation |
| translation release factor activity |
| translation release factor activity, codon nonspecific |
| translation release factor activity, codon specific |
| translation release factor complex |
| translation repressor activity |
| translation repressor activity, non-nucleic acid binding |
| translation repressor activity, nucleic acid binding |
| translation repressor complex |
| translation termination factor activity |
| translational attenuation |
| translational elongation |
| translational frameshifting |
| translational initiation |
| translational readthrough |
| translational termination |
| translesion synthesis |
| translocation of DNA into host |
| translocation of DNA into other organism involved in symbiotic interaction |
| translocation of molecules into host |
| translocation of molecules into other organism involved in symbiotic interaction |
| translocation of molecules into symbiont |
| translocation of peptides or proteins into host |
| translocation of peptides or proteins into host cell cytoplasm |
| translocation of peptides or proteins into other organism involved in symbiotic interaction |
| translocation of peptides or proteins into symbiont |
| translocon complex |
| transmembrane 1-electron transfer carrier |
| transmembrane 2-electron transfer carrier |
| transmembrane collagen trimer |
| transmembrane electron transfer carrier |
| transmembrane histidine kinase cytokinin receptor activity |
| transmembrane receptor histidine kinase activity |
| transmembrane receptor protein kinase activity |
| transmembrane receptor protein phosphatase activity |
| transmembrane receptor protein serine/threonine kinase activity |
| transmembrane receptor protein serine/threonine kinase binding |
| transmembrane receptor protein serine/threonine kinase signaling pathway |
| transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission |
| transmembrane receptor protein tyrosine kinase activator activity |
| transmembrane receptor protein tyrosine kinase activity |
| transmembrane receptor protein tyrosine kinase adaptor activity |
| transmembrane receptor protein tyrosine kinase inhibitor activity |
| transmembrane receptor protein tyrosine kinase signaling pathway |
| transmembrane receptor protein tyrosine phosphatase activity |
| transmembrane receptor protein tyrosine phosphatase signaling pathway |
| transmembrane signaling receptor activity |
| transmembrane transport |
| transmembrane transporter activity |
| transmembrane transporter activity involved in import into cell |
| transmembrane transporter complex |
| transmembrane-ephrin receptor activity |
| transmission of nerve impulse |
| transmission of virus |
| transmitter-gated channel activity |
| transmitter-gated ion channel activity |
| transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential |
| transmitting tissue development |
| transnitrosylase complex |
| trans-octaprenyltranstransferase activity |
| trans-o-hydroxybenzylidenepyruvate hydratase-aldolase activity |
| trans-pentaprenyltranstransferase activity |
| transpiration |
| transport |
| transport of viral material towards nucleus |
| transport of virus |
| transport of virus in host, cell to cell |
| transport of virus in host, cell to cell via plasmodesmata |
| transport of virus in host, tissue to tissue |
| transport of virus in multicellular host |
| transport vesicle |
| transport vesicle lumen |
| transport vesicle membrane |
| transport-coupled glycolytic process through glucose-6-phosphate |
| transporter activity |
| transporter complex |
| transposase activity |
| transposition |
| transposition, DNA-mediated |
| transposition, RNA-mediated |
| transposon integration |
| transsulfuration |
| trans-synaptic protein complex |
| trans-translation |
| trans-translation-dependent protein tagging |
| transverse filament |
| transverse flagellum |
| trans-zeatin biosynthetic process |
| trans-zeatin metabolic process |
| trans-zeatin O-beta-D-glucosyltransferase activity |
| TRAPP complex |
| TRAPPI protein complex |
| TRAPPII protein complex |
| TRAPPIII protein complex |
| traversing start control point of mitotic cell cycle |
| TRC complex |
| trehalase activity |
| trehalose 6-phosphate phosphorylase activity |
| trehalose biosynthesis in response to heat stress |
| trehalose biosynthetic process |
| trehalose biosynthetic process involved in ascospore formation |
| trehalose catabolic process |
| trehalose catabolic process involved in cellular response to stress |
| trehalose catabolism in response to heat stress |
| trehalose metabolic process |
| trehalose metabolism in response to cold stress |
| trehalose metabolism in response to heat stress |
| trehalose metabolism in response to stress |
| trehalose metabolism in response to water deprivation |
| trehalose O-mycolyltransferase activity |
| trehalose transmembrane transporter activity |
| trehalose transport |
| trehalose transport in response to desiccation |
| trehalose transport in response to water deprivation |
| trehalose:proton symporter activity |
| trehalose-phosphatase activity |
| tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity |
| tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity |
| triacetate-lactonase activity |
| triacyl lipopeptide binding |
| trialkylsulfonium hydrolase activity |
| triarch protoxylem |
| triazole transport |
| tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity |
| tricarboxylate secondary active transmembrane transporter activity |
| tricarboxylic acid biosynthetic process |
| tricarboxylic acid catabolic process |
| tricarboxylic acid cycle |
| tricarboxylic acid cycle enzyme complex |
| tricarboxylic acid metabolic process |
| tricarboxylic acid transmembrane transport |
| tricarboxylic acid transmembrane transporter activity |
| tricarboxylic acid transport |
| tricellular tight junction |
| tricellular tight junction assembly |
| tricellular tight junction disassembly |
| trichloroethylene catabolic process |
| trichloroethylene metabolic process |
| trichloro-p-hydroquinone reductive dehalogenase activity |
| trichoblast |
| trichoblast differentiation |
| trichoblast fate specification |
| trichoblast maturation |
| trichocyst |
| trichodiene synthase activity |
| trichome |
| trichome apex |
| trichome branch |
| trichome branching |
| trichome cell |
| trichome development stage |
| trichome differentiation |
| trichome morphogenesis |
| trichome patterning |
| trichome tip |
| trichothecene 3-O-acetyltransferase activity |
| tricoumaroylspermidine meta-hydroxylase activity |
| tricuspid valve development |
| tricuspid valve formation |
| tricuspid valve morphogenesis |
| tricyclic triterpenoid biosynthetic process |
| tricyclic triterpenoid catabolic process |
| tricyclic triterpenoid metabolic process |
| tridecane biosynthetic process |
| tridecane metabolic process |
| triethanolamine catabolic process |
| triethanolamine lyase activity |
| triethanolamine metabolic process |
| TRIF-dependent toll-like receptor 4 signaling pathway |
| TRIF-dependent toll-like receptor signaling pathway |
| triferuloylspermidine meta-hydroxylase activity |
| trifid subdivision of terminal units involved in ureteric bud branching |
| trigeminal ganglion development |
| trigeminal ganglion formation |
| trigeminal ganglion maturation |
| trigeminal ganglion morphogenesis |
| trigeminal ganglion structural organization |
| trigeminal motor nucleus development |
| trigeminal nerve development |
| trigeminal nerve formation |
| trigeminal nerve maturation |
| trigeminal nerve morphogenesis |
| trigeminal nerve structural organization |
| trigeminal sensory nucleus development |
| trigeminothalamic tract morphogenesis |
| triglucosylalkylacylglycerol sulfotransferase activity |
| triglyceride acyl-chain remodeling |
| triglyceride binding |
| triglyceride biosynthetic process |
| triglyceride catabolic process |
| triglyceride homeostasis |
| triglyceride lipase activity |
| triglyceride metabolic process |
| triglyceride mobilization |
| triglyceride transport |
| triglyceride-rich lipoprotein particle |
| triglyceride-rich lipoprotein particle clearance |
| triglyceride-rich lipoprotein particle remodeling |
| triglyceride-sterol O-acyltransferase activity |
| trihydroxyferuloyl spermidine O-methyltransferase activity |
| trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity |
| trihydroxypterocarpan dimethylallyltransferase activity |
| trihydroxystilbene synthase activity |
| trihydroxytoluene dioxygenase activity |
| trimeric positive transcription elongation factor complex b |
| trimetaphosphatase activity |
| trimethylamine dehydrogenase activity |
| trimethylamine methyltransferase activity |
| trimethylamine monooxygenase activity |
| trimethylamine receptor activity |
| trimethylamine-N-oxide reductase (cytochrome c) activity |
| trimethylamine-N-oxide reductase (cytochrome c) complex |
| trimethylamine-N-oxide reductase activity |
| trimethylamine-N-oxide reductase complex |
| trimethylamine-oxide aldolase activity |
| trimethylarsine oxidase activity |
| trimethylenediamine biosynthetic process |
| trimethylenediamine catabolic process |
| trimethylenediamine metabolic process |
| trimethyllysine dioxygenase activity |
| trimethylsulfonium-tetrahydrofolate N-methyltransferase activity |
| trimming of first mannose on A branch |
| trimming of second mannose on A branch |
| trimming of terminal mannose on B branch |
| trimming of terminal mannose on C branch |
| tri-n-butyltin dioxygenase activity |
| tri-n-butyltin metabolic process |
| trinitrophenol dihydride denitratase activity |
| trinitrophenol hydride denitratase activity |
| trinitrotoluene catabolic process |
| trinitrotoluene metabolic process |
| triokinase activity |
| triose phosphate transmembrane transport |
| triose phosphate transport |
| triose-phosphate isomerase activity |
| triose-phosphate transmembrane transporter activity |
| triose-phosphate:phosphate antiporter activity |
| trioxoheptanoate hydrolase activity |
| tripartite ATP-independent periplasmic transporter complex |
| tripartite regional subdivision |
| tripartite viral genome |
| tripeptidase activity |
| tripeptide aminopeptidase activity |
| tripeptide transmembrane transport |
| tripeptide transport |
| tripeptide transporter activity |
| tripeptidyl-peptidase activity |
| triphosphatase activity |
| triphosphoribosyl-dephospho-CoA synthase activity |
| triphosphoric monoester hydrolase activity |
| triplet codon-amino acid adaptor activity |
| triplex DNA binding |
| trisaccharide binding |
| trisaccharide transport |
| trisporic acid biosynthetic process |
| trisporic acid metabolic process |
| triterpenoid biosynthetic process |
| triterpenoid catabolic process |
| triterpenoid metabolic process |
| trithionate hydrolase activity |
| trivalent inorganic anion homeostasis |
| trivalent inorganic cation homeostasis |
| trivalent inorganic cation transmembrane transporter activity |
| trivalent inorganic cation transport |
| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity |
| tRNA (adenine) methyltransferase activity |
| tRNA (adenine-57, 58-N(1)-) methyltransferase activity |
| tRNA (adenine-C2-)-methyltransferase activity |
| tRNA (adenine-N1-)-methyltransferase activity |
| tRNA (adenine-N6-)-methyltransferase activity |
| tRNA (cytosine) methyltransferase activity |
| tRNA (cytosine-2'-O-)-methyltransferase activity |
| tRNA (cytosine-3-)-methyltransferase activity |
| tRNA (cytosine-5-)-methyltransferase activity |
| tRNA (guanine(37)-N(1))-methyltransferase activity |
| tRNA (guanine(9)-N(1))-methyltransferase activity |
| tRNA (guanine) methyltransferase activity |
| tRNA (guanine-N1-)-methyltransferase activity |
| tRNA (guanine-N2-)-methyltransferase activity |
| tRNA (guanine-N7-)-methyltransferase activity |
| tRNA (guanosine-2'-O-)-methyltransferase activity |
| tRNA (m1A) methyltransferase complex |
| tRNA (m2G10) methyltransferase complex |
| tRNA (m5U54) methyltransferase activity |
| tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase |
| tRNA (uracil) methyltransferase activity |
| tRNA (uracil-2'-O-)-methyltransferase activity |
| tRNA 2'-O-ribose methylation guide activity |
| tRNA 2'-phosphotransferase activity |
| tRNA 2-selenouridine synthase activity |
| tRNA 3'-end processing |
| tRNA 3'-terminal CCA addition |
| tRNA 3'-trailer cleavage |
| tRNA 3'-trailer cleavage, endonucleolytic |
| tRNA 3'-trailer cleavage, exonucleolytic |
| tRNA 4-thiouridine biosynthesis |
| tRNA 5-carboxymethoxyuridine methyltransferase activity |
| tRNA 5'-leader removal |
| tRNA A64-2'-O-ribosylphosphate transferase activity |
| tRNA acetylation |
| tRNA adenylyltransferase activity |
| tRNA aminoacylation |
| tRNA aminoacylation for mitochondrial protein translation |
| tRNA aminoacylation for nonribosomal peptide biosynthetic process |
| tRNA aminoacylation for protein translation |
| tRNA binding |
| tRNA C5-cytosine methylation |
| tRNA catabolic process |
| tRNA cytidylyltransferase activity |
| tRNA destabilization |
| tRNA dihydrouridine synthase activity |
| tRNA dihydrouridine synthesis |
| tRNA dimethylallyltransferase activity |
| tRNA end turnover |
| tRNA exon ligation |
| tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate |
| tRNA exon ligation utilizing ATP as source of linkage phosphate |
| tRNA exon ligation utilizing GTP as source of linkage phosphate |
| tRNA export from nucleus |
| tRNA gene clustering |
| tRNA guanine ribose methylation |
| tRNA guanylyltransferase activity |
| tRNA import into mitochondrion |
| tRNA import into nucleus |
| tRNA m2,2-guanine biosynthesis |
| tRNA m6t6A37 methyltransferase activity |
| tRNA metabolic process |
| tRNA methylation |
| tRNA methylation in response to nitrogen starvation |
| tRNA methylthiolation |
| tRNA methyltransferase activity |
| tRNA methyltransferase complex |
| tRNA modification |
| tRNA modification guide activity |
| tRNA N1-guanine methylation |
| tRNA N2-guanine methylation |
| tRNA N-acetyltransferase activity |
| tRNA nucleoside ribose methylation |
| tRNA nucleotidyltransferase activity |
| tRNA processing |
| tRNA pseudouridine synthesis |
| tRNA pseudouridylation guide activity |
| tRNA re-export from nucleus |
| tRNA seleno-modification |
| tRNA splicing, via endonucleolytic cleavage and ligation |
| tRNA stabilization |
| tRNA thio-modification |
| tRNA threonylcarbamoyladenosine dehydratase |
| tRNA threonylcarbamoyladenosine metabolic process |
| tRNA threonylcarbamoyladenosine modification |
| tRNA transcription |
| tRNA transcription from RNA polymerase III promoter |
| tRNA transmembrane transporter activity |
| tRNA transport |
| tRNA wobble adenosine to inosine editing |
| tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis. |
| tRNA wobble base modification |
| tRNA wobble cytosine modification |
| tRNA wobble guanine modification |
| tRNA wobble position uridine thiolation |
| tRNA wobble uridine modification |
| tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity |
| tRNA(Ile)-lysidine synthase activity |
| tRNA-5-taurinomethyluridine 2-sulfurtransferase |
| tRNA-containing ribonucleoprotein complex export from nucleus |
| tRNA-intron endonuclease activity |
| tRNA-intron endonuclease complex |
| tRNA-queuosine beta-mannosyltransferase activity |
| tRNA-specific adenosine deaminase activity |
| tRNA-specific adenosine-34 deaminase activity |
| tRNA-specific adenosine-34 deaminase complex |
| tRNA-specific adenosine-37 deaminase activity |
| tRNA-specific ribonuclease activity |
| tRNA-splicing ligase complex |
| tRNA-type intron splice site recognition and cleavage |
| tRNA-uridine aminocarboxypropyltransferase activity |
| trochlear nerve development |
| trochlear nerve formation |
| trochlear nerve maturation |
| trochlear nerve morphogenesis |
| trochlear nerve structural organization |
| tropane alkaloid biosynthetic process |
| tropane alkaloid metabolic process |
| trophectodermal cell differentiation |
| trophectodermal cell fate commitment |
| trophectodermal cell proliferation |
| trophectodermal cellular morphogenesis |
| trophoblast cell migration |
| trophoblast giant cell differentiation |
| tropine dehydrogenase activity |
| tropinesterase activity |
| tropinone reductase activity |
| tropism |
| tropomyosin binding |
| tropomyosin kinase activity |
| troponin C binding |
| troponin complex |
| troponin I binding |
| troponin T binding |
| trunk neural crest cell migration |
| trunk segmentation |
| trypanothione biosynthetic process |
| trypanothione catabolic process |
| trypanothione metabolic process |
| trypanothione synthase activity |
| trypanothione-disulfide reductase activity |
| tryparedoxin peroxidase activity |
| trypsinogen activation |
| tryptamine:oxygen oxidoreductase (deaminating) activity |
| tryptophan 2,3-dioxygenase activity |
| tryptophan 2-C-methyltransferase activity |
| tryptophan 2'-dioxygenase activity |
| tryptophan 2-monooxygenase activity |
| tryptophan 5-monooxygenase activity |
| tryptophan alpha,beta-oxidase activity |
| tryptophan biosynthetic process |
| tryptophan catabolic process |
| tryptophan catabolic process to acetyl-CoA |
| tryptophan catabolic process to catechol |
| tryptophan catabolic process to indole-3-acetate |
| tryptophan catabolic process to kynurenine |
| tryptophan dehydrogenase activity |
| tryptophan dimethylallyltransferase activity |
| tryptophan hydroxylase activator activity |
| tryptophan metabolic process |
| tryptophan synthase activity |
| tryptophan transport |
| tryptophanamidase activity |
| tryptophanase activity |
| tryptophan-independent indoleacetic acid biosynthetic process |
| tryptophan-phenylpyruvate transaminase activity |
| tryptophan-tRNA ligase activity |
| tryptophanyl-tRNA aminoacylation |
| TSC1-TSC2 complex |
| t-SNARE clustering |
| TTP biosynthetic process |
| TTP catabolic process |
| TTP metabolic process |
| TTP reductase activity |
| T-tubule |
| T-tubule organization |
| tube closure |
| tube development |
| tube formation |
| tube fusion |
| tube lumen cavitation |
| tube morphogenesis |
| tube viral factory |
| tuber |
| tuber axillary shoot |
| tuber cortex |
| tuber interfascicular region |
| tuber perimedullary zone |
| tuber pith |
| tuber storage parenchyma |
| tubercle |
| tuberculosinol biosynthetic process |
| tuberous root |
| tuberous root tuber |
| tubovesicular membrane network |
| tubular endosome |
| tubulin binding |
| tubulin complex |
| tubulin complex assembly |
| tubulin deacetylase activity |
| tubulin deacetylation |
| tubulin folding cofactor complex |
| tubulin N-acetyltransferase activity |
| tubulin-dependent ATPase activity |
| tubulin-glutamic acid ligase activity |
| tubulin-glycine ligase activity |
| tubulin-tyrosine ligase activity |
| tubulobulbar complex |
| tubuloglomerular feedback |
| tumor necrosis factor (ligand) superfamily member 11 production |
| tumor necrosis factor binding |
| tumor necrosis factor biosynthetic process |
| tumor necrosis factor production |
| tumor necrosis factor receptor binding |
| tumor necrosis factor receptor superfamily binding |
| tumor necrosis factor receptor superfamily complex |
| tumor necrosis factor secretion |
| tumor necrosis factor superfamily cytokine production |
| tumor necrosis factor-activated receptor activity |
| tumor necrosis factor-mediated signaling pathway |
| tungstate binding |
| tungstate ion transport |
| tungstate transmembrane transporter activity |
| tungstate transmembrane-transporting ATPase activity |
| tungsten incorporation into metallo-sulfur cluster |
| tungsten incorporation into tungsten-molybdopterin complex |
| tungsten incorporation via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) |
| tunica |
| turning behavior |
| turning behavior involved in mating |
| t-UTP complex |
| twitch skeletal muscle contraction |
| type 1 angiotensin receptor binding |
| type 1 cannabinoid receptor binding |
| type 1 cysteinyl leukotriene receptor binding |
| type 1 fibroblast growth factor receptor binding |
| type 1 galanin receptor binding |
| type 1 hypocretin receptor binding |
| type 1 melanin-concentrating hormone receptor binding |
| type 1 melanocortin receptor binding |
| type 1 member 1 taste receptor binding |
| type 1 member 2 taste receptor binding |
| type 1 member 3 taste receptor binding |
| type 1 metabotropic GABA receptor binding |
| type 1 metabotropic glutamate receptor binding |
| type 1 neuromedin U receptor binding |
| type 1 neuropeptide Y receptor binding |
| type 1 neurotensin receptor binding |
| type 1 parathyroid hormone receptor binding |
| type 1 proteinase activated receptor binding |
| type 1 somatostatin receptor binding |
| type 1 vasoactive intestinal polypeptide receptor binding |
| type 1A melatonin receptor binding |
| type 1B melatonin receptor binding |
| type 1B serotonin receptor binding |
| type 1D serotonin receptor binding |
| type 1E serotonin receptor binding |
| type 1F serotonin receptor binding |
| type 2 angiotensin receptor binding |
| type 2 cannabinoid receptor binding |
| type 2 cysteinyl leukotriene receptor binding |
| type 2 fibroblast growth factor receptor binding |
| type 2 galanin receptor binding |
| type 2 hypocretin receptor binding |
| type 2 immune response |
| type 2 melanin-concentrating hormone receptor binding |
| type 2 metabotropic GABA receptor binding |
| type 2 metabotropic glutamate receptor binding |
| type 2 neuromedin U receptor binding |
| type 2 neuropeptide Y receptor binding |
| type 2 proteinase activated receptor binding |
| type 2 somatostatin receptor binding |
| type 2 vasoactive intestinal polypeptide receptor binding |
| type 2A serotonin receptor binding |
| type 2B serotonin receptor binding |
| type 2C serotonin receptor binding |
| type 3 galanin receptor binding |
| type 3 melanocortin receptor binding |
| type 3 metabotropic glutamate receptor binding |
| type 3 proteinase activated receptor binding |
| type 3 somatostatin receptor binding |
| type 4 melanocortin receptor binding |
| type 4 metabotropic glutamate receptor binding |
| type 4 neuropeptide Y receptor binding |
| type 4 proteinase activated receptor binding |
| type 4 serotonin receptor binding |
| type 4 somatostatin receptor binding |
| type 5 melanocortin receptor binding |
| type 5 metabotropic glutamate receptor binding |
| type 5 neuropeptide Y receptor binding |
| type 5 somatostatin receptor binding |
| type 5A serotonin receptor binding |
| type 5B serotonin receptor binding |
| type 6 metabotropic glutamate receptor binding |
| type 6 serotonin receptor binding |
| type 7 metabotropic glutamate receptor binding |
| type 7 serotonin receptor binding |
| type 8 metabotropic glutamate receptor binding |
| type A cholecystokinin receptor binding |
| type B gastrin/cholecystokinin receptor binding |
| type B pancreatic cell apoptotic process |
| type B pancreatic cell development |
| type B pancreatic cell differentiation |
| type B pancreatic cell fate commitment |
| type B pancreatic cell maturation |
| type B pancreatic cell proliferation |
| type I activin receptor binding |
| type I hypersensitivity |
| type I hypersensitivity mediated by basophils |
| type I hypersensitivity mediated by mast cells |
| type I interferon binding |
| type I interferon biosynthetic process |
| type I interferon production |
| type I interferon receptor activity |
| type I interferon receptor binding |
| type I interferon receptor complex |
| type I interferon secretion |
| type I interferon signaling pathway |
| Type I pneumocyte differentiation |
| type I protein secretion system complex |
| Type I site-specific deoxyribonuclease activity |
| Type I site-specific deoxyribonuclease complex |
| type I terminal bouton |
| type I transforming growth factor beta receptor binding |
| type Ib terminal bouton |
| type II activin receptor binding |
| type II hypersensitivity |
| Type II pneumocyte differentiation |
| type II polyketide synthase complex |
| type II protein secretion system complex |
| Type II site-specific deoxyribonuclease activity |
| Type II site-specific deoxyribonuclease complex |
| type II terminal bouton |
| type II transforming growth factor beta receptor binding |
| type IIa hypersensitivity |
| type IIb hypersensitivity |
| type III hypersensitivity |
| type III interferon binding |
| type III interferon production |
| type III interferon receptor activity |
| type III interferon secretion |
| type III interferon signaling pathway |
| type III intermediate filament |
| type III polyketide synthase complex |
| type III protein secretion system complex |
| Type III site-specific deoxyribonuclease activity |
| Type III site-specific deoxyribonuclease complex |
| type III terminal bouton |
| type III transforming growth factor beta receptor binding |
| type Is terminal bouton |
| type IV hypersensitivity |
| Type IV pili-dependent aggregation |
| Type IV pili-dependent localized adherence to host |
| type IV pilus |
| type IV pilus biogenesis |
| type IV pilus-dependent motility |
| type IV secretion system complex |
| Type IV site-specific deoxyribonuclease activity |
| Type IV site-specific deoxyribonuclease complex |
| type V protein secretion system complex |
| type VI protein secretion system complex |
| Type-I cohesin domain binding |
| Type-I dockerin domain binding |
| Type-II cohesin domain binding |
| Type-II dockerin domain binding |
| Type-III cohesin domain binding |
| Type-III dockerin domain binding |
| tyramine biosynthetic process |
| tyramine N-feruloyltransferase activity |
| tyramine N-methyltransferase activity |
| tyramine receptor activity |
| tyramine secretion |
| tyramine secretion, neurotransmission |
| tyramine signaling pathway |
| tyramine-beta hydroxylase activity |
| tyrocidine biosynthetic process |
| tyrocidine catabolic process |
| tyrocidine metabolic process |
| tyrosine 2,3-aminomutase activity |
| tyrosine 3-monooxygenase activator activity |
| tyrosine 3-monooxygenase activity |
| tyrosine ammonia-lyase activity |
| tyrosine binding |
| tyrosine biosynthetic process |
| tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate |
| tyrosine biosynthetic process from chorismate via L-arogenate |
| tyrosine biosynthetic process, by oxidation of phenylalanine |
| tyrosine catabolic process |
| tyrosine catabolic process to fumarate |
| tyrosine catabolic process to phosphoenolpyruvate |
| tyrosine decarboxylase activity |
| tyrosine metabolic process |
| tyrosine N-monooxygenase activity |
| tyrosine phenol-lyase activity |
| tyrosine phosphorylation of STAT protein |
| tyrosine phosphorylation of Stat1 protein |
| tyrosine phosphorylation of Stat2 protein |
| tyrosine phosphorylation of Stat3 protein |
| tyrosine phosphorylation of Stat4 protein |
| tyrosine phosphorylation of Stat5 protein |
| tyrosine phosphorylation of Stat6 protein |
| tyrosine phosphorylation of Stat7 protein |
| tyrosine transport |
| tyrosine:tyramine antiporter activity |
| tyrosine-arginine ligase activity |
| tyrosine-based site-specific recombinase activity |
| tyrosine-ester sulfotransferase activity |
| tyrosine-tRNA ligase activity |
| tyrosyl-DNA phosphodiesterase activity |
| tyrosyl-RNA phosphodiesterase activity |
| tyrosyl-tRNA aminoacylation |
| U1 snRNA 3'-end processing |
| U1 snRNA binding |
| U1 snRNP |
| U1 snRNP binding |
| U11 snRNA binding |
| U11 snRNP |
| U11/U12 snRNP |
| U12 snRNA binding |
| U12 snRNP |
| U12-type catalytic step 1 spliceosome |
| U12-type catalytic step 2 spliceosome |
| U12-type post-mRNA release spliceosomal complex |
| U12-type post-spliceosomal complex |
| U12-type precatalytic spliceosome |
| U12-type prespliceosome |
| U12-type spliceosomal complex |
| U2 snRNA 3'-end processing |
| U2 snRNA binding |
| U2 snRNP |
| U2 snRNP binding |
| U2AF |
| U2-type catalytic step 1 spliceosome |
| U2-type catalytic step 2 spliceosome |
| U2-type post-mRNA release spliceosomal complex |
| U2-type post-spliceosomal complex |
| U2-type precatalytic spliceosome |
| U2-type prespliceosome |
| U2-type prespliceosome assembly |
| U2-type spliceosomal complex |
| U3 snoRNA binding |
| U4 snRNA 3'-end processing |
| U4 snRNA binding |
| U4 snRNP |
| U4/U6 snRNP |
| U4/U6 x U5 tri-snRNP complex |
| U4atac snRNA binding |
| U4atac snRNP |
| U4atac/U6atac snRNP |
| U4atac/U6atac x U5 tri-snRNP complex |
| U5 snRNA 3'-end processing |
| U5 snRNA binding |
| U5 snRNP |
| U6 2'-O-snRNA methylation |
| U6 snRNA 3'-end binding |
| U6 snRNA 3'-end processing |
| U6 snRNA binding |
| U6 snRNP |
| U6atac snRNA binding |
| U6atac snRNP |
| U7 snRNA binding |
| U7 snRNP |
| UAA codon-amino acid adaptor activity |
| UAC codon-amino acid adaptor activity |
| UAG codon-amino acid adaptor activity |
| UAU codon-amino acid adaptor activity |
| UBC13-MMS2 complex |
| UBC13-UEV1A complex |
| ubiquinol-cytochrome-c reductase activity |
| ubiquinone binding |
| ubiquinone biosynthetic process |
| ubiquinone biosynthetic process from chorismate |
| ubiquinone biosynthetic process from tyrosine |
| ubiquinone biosynthetic process via 2-polyprenylphenol |
| ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate |
| ubiquinone catabolic process |
| ubiquinone metabolic process |
| ubiquinone-6 binding |
| ubiquinone-6 biosynthetic process |
| ubiquinone-6 catabolic process |
| ubiquinone-6 metabolic process |
| ubiquitin activating enzyme activity |
| ubiquitin activating enzyme binding |
| ubiquitin binding |
| ubiquitin conjugating enzyme activity |
| ubiquitin conjugating enzyme binding |
| ubiquitin conjugating enzyme complex |
| ubiquitin homeostasis |
| ubiquitin ligase activator activity |
| ubiquitin ligase complex |
| ubiquitin protein ligase activity |
| ubiquitin protein ligase activity involved in chloroplast disassembly |
| ubiquitin protein ligase activity involved in ERAD pathway |
| ubiquitin protein ligase binding |
| ubiquitinated histone binding |
| ubiquitin-calmodulin ligase activity |
| ubiquitin-dependent endocytosis |
| ubiquitin-dependent protein catabolic process |
| ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
| ubiquitin-dependent protein catabolic process via the N-end rule pathway |
| ubiquitin-dependent SMAD protein catabolic process |
| ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway |
| ubiquitin-like protein binding |
| ubiquitin-like protein conjugating enzyme activity |
| ubiquitin-like protein conjugating enzyme binding |
| ubiquitin-like protein ligase activity |
| ubiquitin-like protein ligase binding |
| ubiquitin-like protein transferase activity |
| ubiquitin-like protein-specific endopeptidase activity |
| ubiquitin-like protein-specific isopeptidase activity |
| ubiquitin-like protein-specific protease activity |
| ubiquitin-protein transferase activator activity |
| ubiquitin-protein transferase activity |
| ubiquitin-protein transferase inhibitor activity |
| ubiquitin-protein transferase regulator activity |
| ubiquitin-specific protease activity |
| ubiquitin-specific protease activity involved in negative regulation of ERAD pathway |
| ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol |
| ubiquitin-specific protease activity involved in positive regulation of ERAD pathway |
| ubiquitin-specific protease binding |
| ubiquitin-ubiquitin ligase activity |
| ubiquitinyl hydrolase activity |
| Ubisch body |
| Ubp3-Bre5 deubiquitination complex |
| UBR1-RAD6 ubiquitin ligase complex |
| UCA codon-amino acid adaptor activity |
| UCC codon-amino acid adaptor activity |
| UCG codon-amino acid adaptor activity |
| UCU codon-amino acid adaptor activity |
| UDP biosynthetic process |
| UDP catabolic process |
| UDP metabolic process |
| UDP phosphorylation |
| UDP reductase activity |
| UDP-2,3-diacylglucosamine hydrolase activity |
| UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose transaminase activity |
| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity |
| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthetic process |
| UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolic process |
| UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process |
| UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity |
| UDP-4-keto-rhamnose-4-keto-reductase activity |
| UDP-activated nucleotide receptor activity |
| UDP-arabinopyranose mutase activity |
| UDP-arabinose 4-epimerase activity |
| UDP-D-apiose biosynthetic process |
| UDP-D-apiose metabolic process |
| UDP-D-galactose biosynthetic process |
| UDP-D-galactose metabolic process |
| UDP-D-galacturonate biosynthetic process |
| UDP-D-galacturonate metabolic process |
| UDP-D-xylose biosynthetic process |
| UDP-D-xylose metabolic process |
| UDP-galactopyranose mutase activity |
| UDP-galactose transmembrane import into Golgi lumen |
| UDP-galactose transmembrane transport |
| UDP-galactose transmembrane transporter activity |
| UDP-galactose transport |
| UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity |
| UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity |
| UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity |
| UDP-galactose-UDP-N-acetylglucosamine galactose phosphotransferase activity |
| UDP-galactosyltransferase activity |
| UDP-galacturonate decarboxylase activity |
| UDP-glucosamine 4-epimerase activity |
| UDP-glucose 4,6-dehydratase activity |
| UDP-glucose 4-epimerase activity |
| UDP-glucose 6-dehydrogenase activity |
| UDP-glucose catabolic process |
| UDP-glucose metabolic process |
| UDP-glucose transmembrane transporter activity |
| UDP-glucose transport |
| UDP-glucose:4-aminobenzoate acylglucosyltransferase activity |
| UDP-glucose:glycoprotein glucosyltransferase activity |
| UDP-glucose:hexose-1-phosphate uridylyltransferase activity |
| UDP-glucose-glycoprotein glucose phosphotransferase activity |
| UDP-glucosylation |
| UDP-glucosyltransferase activity |
| UDP-glucuronate 4-epimerase activity |
| UDP-glucuronate 5'-epimerase activity |
| UDP-glucuronate biosynthetic process |
| UDP-glucuronate decarboxylase activity |
| UDP-glucuronate metabolic process |
| UDP-glucuronic acid transmembrane transporter activity |
| UDP-glucuronic acid transport |
| UDP-glycosyltransferase activity |
| UDP-L-arabinose biosynthetic process |
| UDP-L-arabinose metabolic process |
| UDP-L-rhamnose synthase activity |
| UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity |
| UDP-N-acetyl-D-mannosamine dehydrogenase activity |
| UDP-N-acetylgalactosamine biosynthetic process |
| UDP-N-acetylgalactosamine catabolic process |
| UDP-N-acetylgalactosamine diphosphorylase activity |
| UDP-N-acetylgalactosamine metabolic process |
| UDP-N-acetylgalactosamine transmembrane transporter activity |
| UDP-N-acetylgalactosamine transport |
| UDP-N-acetylgalactosamine:N-acetylneuraminyl-alpha-2,3-galactosyl-beta-R 1,4-N-acetylgalactosaminyltransferase activity |
| UDP-N-acetylgalactosamine-4-sulfate sulfotransferase activity |
| UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity |
| UDP-N-acetylglucosamine 2-epimerase activity |
| UDP-N-acetylglucosamine 4-epimerase activity |
| UDP-N-acetylglucosamine 6-dehydrogenase activity |
| UDP-N-acetylglucosamine biosynthesis involved in chitin biosynthesis |
| UDP-N-acetylglucosamine biosynthetic process |
| UDP-N-acetylglucosamine catabolic process |
| UDP-N-acetylglucosamine diphosphorylase activity |
| UDP-N-acetylglucosamine metabolic process |
| UDP-N-acetylglucosamine transferase complex |
| UDP-N-acetylglucosamine transmembrane transport |
| UDP-N-acetylglucosamine transmembrane transporter activity |
| UDP-N-acetylglucosamine transport |
| UDP-N-acetylglucosamine:serine-protein N-acetylglucosamine-1-phosphotransferase activity |
| UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity |
| UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity |
| UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex |
| UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity |
| UDP-N-acetylmuramate dehydrogenase activity |
| UDP-N-acetylmuramate-L-alanine ligase activity |
| UDP-N-acetylmuramoylalanine-D-glutamate ligase activity |
| UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity |
| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity |
| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity |
| UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity |
| UDP-N-acetylmuramoylpentapeptide-lysine N6-alanyltransferase activity |
| UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity |
| UDP-rhamnose biosynthetic process |
| UDP-rhamnose metabolic process |
| UDP-sugar diphosphatase activity |
| UDPsulfoquinovose synthase activity |
| UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity |
| UDP-xylose transmembrane transporter activity |
| UDP-xylose transport |
| UDP-xylosyltransferase activity |
| UFD1-NPL4 complex |
| UFM1 activating enzyme activity |
| UFM1 conjugating enzyme activity |
| UFM1 hydrolase activity |
| UFM1 ligase activity |
| UFM1 transferase activity |
| UGA codon-amino acid adaptor activity |
| UGC codon-amino acid adaptor activity |
| UGG codon-amino acid adaptor activity |
| UGU codon-amino acid adaptor activity |
| ultradian rhythm |
| ulvan lyase activity |
| umami taste receptor activity |
| umbilical cord development |
| umbilical cord morphogenesis |
| UMP biosynthetic process |
| UMP catabolic process |
| UMP kinase activity |
| UMP metabolic process |
| UMP salvage |
| uncoating of virus |
| unconventional myosin complex |
| undecan-2-one biosynthetic process |
| undecan-2-one metabolic process |
| undecaprenol kinase activity |
| undecaprenyl-diphosphatase activity |
| undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity |
| undecaprenyl-phosphate galactose phosphotransferase activity |
| undecaprenyl-phosphate glucose phosphotransferase activity |
| undecaprenyl-phosphate mannosyltransferase activity |
| unencapsulated part of cell |
| unfolded protein binding |
| unicellular plant gametangium |
| unicellular trichome |
| unicellular trichome apex |
| unicellular trichome branch |
| unicellular trichome tip |
| unidimensional cell growth |
| unidirectional conjugation |
| unifacial vascular leaf |
| uniplex complex |
| uniporter activity |
| unmethylated CpG binding |
| unsaturated fatty acid biosynthetic process |
| unsaturated fatty acid metabolic process |
| unsaturated monocarboxylic acid metabolic process |
| unsubstituted mannan metabolic process |
| upper floret of pedicellate spikelet of ear |
| upper floret of pedicellate spikelet of tassel |
| upper floret of sessile spikelet of ear |
| upper floret of sessile spikelet of tassel |
| upper glume |
| upper glume of ear spikelet |
| upper glume of pedicellate spikelet of ear |
| upper glume of pedicellate spikelet of tassel |
| upper glume of sessile spikelet of ear |
| upper glume of sessile spikelet of tassel |
| upper glume of tassel spikelet |
| upper tip-link density |
| upright ray secondary xylem parenchyma cell |
| upstream stimulatory factor complex |
| uptake transmembrane transporter activity |
| uracil binding |
| uracil biosynthetic process |
| uracil catabolic process |
| uracil dehydrogenase activity |
| uracil DNA N-glycosylase activity |
| uracil import across plasma membrane |
| uracil import into cell |
| uracil metabolic process |
| uracil oxygenase activity |
| uracil phosphoribosyltransferase activity |
| uracil salvage |
| uracil transmembrane transport |
| uracil transmembrane transporter activity |
| uracil transport |
| uracil:cation symporter activity |
| uracil-5-carboxylate decarboxylase activity |
| uracilylalanine synthase activity |
| urate biosynthetic process |
| urate catabolic process |
| urate homeostasis |
| urate metabolic process |
| urate oxidase activity |
| urate transmembrane transporter activity |
| urate transport |
| urate-ribonucleotide phosphorylase activity |
| urea binding |
| urea carboxylase activity |
| urea catabolic process |
| urea channel activity |
| urea cycle |
| urea homeostasis |
| urea metabolic process |
| urea transmembrane transport |
| urea transmembrane transporter activity |
| urea transport |
| urea:sodium symporter activity |
| urease activator activity |
| urease activity |
| urease complex |
| urea-transporting ATPase activity |
| uredinium development |
| uredospore formation |
| ureide biosynthetic process |
| ureide catabolic process |
| ureide metabolic process |
| ureidoglycine aminohydrolase activity |
| ureidoglycolate dehydrogenase activity |
| ureidoglycolate hydrolase activity |
| ureidoglycolate lyase activity |
| ureidosuccinase activity |
| ureter development |
| ureter epithelial cell differentiation |
| ureter maturation |
| ureter morphogenesis |
| ureter part of ureteric bud development |
| ureter smooth muscle cell differentiation |
| ureter smooth muscle contraction |
| ureter smooth muscle development |
| ureter urothelium development |
| ureteric bud development |
| ureteric bud elongation |
| ureteric bud formation |
| ureteric bud invasion |
| ureteric bud morphogenesis |
| ureteric peristalsis |
| urethanase activity |
| urethra development |
| urethra epithelium development |
| uridine biosynthetic process |
| uridine catabolic process |
| uridine kinase activity |
| uridine metabolic process |
| uridine nucleosidase activity |
| uridine nucleotide receptor activity |
| uridine phosphorylase activity |
| uridine to cytidine editing |
| uridine transmembrane transporter activity |
| uridine transport |
| uridine:hydrogen ion symporter activity |
| uridine-diphosphatase activity |
| uridine-rich cytoplasmic polyadenylylation element binding |
| uridylate kinase activity |
| uridylyltransferase activity |
| urinary bladder development |
| urinary bladder smooth muscle contraction |
| urinary tract smooth muscle contraction |
| URM1 activating enzyme activity |
| URM1 conjugating enzyme activity |
| URM1 ligase activity |
| URM1 transferase activity |
| urocanate hydratase activity |
| urogenital system development |
| urokinase plasminogen activator receptor activity |
| urokinase plasminogen activator signaling pathway |
| uronate dehydrogenase activity |
| uronic acid metabolic process |
| uronic acid transmembrane transporter activity |
| uronic acid transport |
| uronolactonase activity |
| uropod |
| uropod assembly |
| uropod membrane |
| uropod organization |
| uropod retraction |
| uroporphyrin-III C-methyltransferase activity |
| uroporphyrinogen decarboxylase activity |
| uroporphyrinogen III biosynthetic process |
| uroporphyrinogen III metabolic process |
| uroporphyrinogen-III synthase activity |
| urotensin II receptor activity |
| urotensin receptor binding |
| urothelial cell proliferation |
| USH2 complex |
| uterine epithelium development |
| uterine gland development |
| uterine smooth muscle contraction |
| uterine smooth muscle relaxation |
| uterine wall breakdown |
| uterine wall growth |
| uterus development |
| uterus morphogenesis |
| UTP binding |
| UTP biosynthetic process |
| UTP catabolic process |
| UTP diphosphatase activity |
| UTP metabolic process |
| UTP:arabinose-1-phosphate uridylyltransferase activity |
| UTP:galactose-1-phosphate uridylyltransferase activity |
| UTP:glucose-1-phosphate uridylyltransferase activity |
| UTP:glucose-1-phosphate uridylyltransferase regulator activity |
| UTP:xylose-1-phosphate uridylyltransferase activity |
| UTP-activated nucleotide receptor activity |
| UTP-C complex |
| UTP-monosaccharide-1-phosphate uridylyltransferase activity |
| UUA codon-amino acid adaptor activity |
| UUC codon-amino acid adaptor activity |
| UUG codon-amino acid adaptor activity |
| UUU codon-amino acid adaptor activity |
| UV protection |
| UV-A, blue light phototransduction |
| UV-damage excision repair |
| UV-damage excision repair, DNA incision |
| V(D)J recombination |
| V1A vasopressin receptor binding |
| V1B vasopressin receptor binding |
| V2 vasopressin receptor binding |
| vacuolar acidification |
| vacuolar amino acid transmembrane transport |
| vacuolar calcium ion homeostasis |
| vacuolar HOPS complex |
| vacuolar lumen |
| vacuolar membrane |
| vacuolar part |
| vacuolar phosphate transport |
| vacuolar protein processing |
| vacuolar proton-transporting V-type ATPase complex |
| vacuolar proton-transporting V-type ATPase complex assembly |
| vacuolar proton-transporting V-type ATPase, V0 domain |
| vacuolar proton-transporting V-type ATPase, V1 domain |
| vacuolar sequestering |
| vacuolar sequestering of sodium ion |
| vacuolar sorting signal binding |
| vacuolar transmembrane transport |
| vacuolar transport |
| vacuolar transporter chaperone complex |
| vacuole |
| vacuole fusion |
| vacuole fusion, non-autophagic |
| vacuole inheritance |
| vacuole organization |
| vacuole-ER tethering |
| vacuole-mitochondrion membrane contact site |
| vagina development |
| vagus nerve development |
| vagus nerve formation |
| vagus nerve maturation |
| vagus nerve morphogenesis |
| vagus nerve structural organization |
| valine biosynthetic process |
| valine catabolic process |
| valine catabolic process to isobutanol |
| valine decarboxylase activity |
| valine dehydrogenase (NAD) activity |
| valine dehydrogenase (NADP) activity |
| valine import |
| valine metabolic process |
| valine transport |
| valine-3-methyl-2-oxovalerate transaminase activity |
| valine-pyruvate transaminase activity |
| valine-tRNA ligase activity |
| valve |
| valyl-tRNA aminoacylation |
| VAMP4-syntaxin-6-syntaxin-16-Vti1a complex |
| vanadium incorporation into metallo-sulfur cluster |
| vanadium ion binding |
| vanadium ion transmembrane transporter activity |
| vanadium ion transport |
| vanadium-iron nitrogenase complex |
| vancomycin biosynthetic process |
| vancomycin metabolic process |
| vanillate amino acid synthetase activity |
| vanillate monooxygenase activity |
| vanillate O-demethylase (anaerobic) activity |
| vanillin biosynthetic process |
| vanillin catabolic process |
| vanillin dehydrogenase activity |
| vanillin metabolic process |
| vanillin synthase activity |
| vanillyl-alcohol oxidase activity |
| varicosity |
| vascular associated smooth muscle cell migration |
| vascular bundle |
| vascular cambium |
| vascular cord development |
| vascular endothelial growth factor binding |
| vascular endothelial growth factor production |
| vascular endothelial growth factor receptor 1 binding |
| vascular endothelial growth factor receptor 2 binding |
| vascular endothelial growth factor receptor 3 binding |
| vascular endothelial growth factor receptor binding |
| vascular endothelial growth factor receptor signaling pathway |
| vascular endothelial growth factor receptor signaling pathway involved in lymphatic endothelial cell fate commitment |
| vascular endothelial growth factor receptor-1 signaling pathway |
| vascular endothelial growth factor receptor-2 signaling pathway |
| vascular endothelial growth factor receptor-3 signaling pathway |
| vascular endothelial growth factor signaling pathway |
| vascular endothelial growth factor-activated receptor activity |
| vascular leaf |
| vascular leaf abaxial meristem |
| vascular leaf adaxial meristem |
| vascular leaf anlagen |
| vascular leaf anlagen formation stage |
| vascular leaf development stage |
| vascular leaf differentiation stage |
| vascular leaf expansion stage |
| vascular leaf founder cell |
| vascular leaf initiation stage |
| vascular leaf meristematic apical cell |
| vascular leaf post-expansion stage |
| vascular leaf primordium |
| vascular leaf primordium abaxial side |
| vascular leaf primordium adaxial side |
| vascular leaf primordium formation stage |
| vascular leaf primordium polarity determination stage |
| vascular leaf senescent stage |
| vascular process in circulatory system |
| vascular shoot axis meristematic apical cell |
| vascular smooth muscle cell development |
| vascular smooth muscle cell differentiation |
| vascular smooth muscle cell fate commitment |
| vascular smooth muscle cell fate determination |
| vascular smooth muscle cell fate specification |
| vascular smooth muscle cell proliferation |
| vascular smooth muscle contraction |
| vascular system |
| vascular tissue development stage |
| vascular transport |
| vascular wound healing |
| vasculature development |
| vasculogenesis |
| vasculogenesis involved in coronary vascular morphogenesis |
| vasoactive intestinal polypeptide receptor activity |
| vasoactive intestinal polypeptide receptor binding |
| vasoconstriction |
| vasoconstriction by vasopressin involved in systemic arterial blood pressure control |
| vasoconstriction of artery involved in aortic body chemoreceptor response to lowering of systemic arterial blood pressure |
| vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure |
| vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure |
| vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure |
| vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure |
| vasodilation |
| vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure |
| vasodilation by angiotensin involved in regulation of systemic arterial blood pressure |
| vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure |
| vasodilation involved in acute inflammatory response |
| vasodilation of artery involved in baroreceptor response to increased systemic arterial blood pressure |
| vasomotion |
| vasopressin receptor activity |
| vasopressin receptor binding |
| vasopressin secretion |
| VCB complex |
| VCP-NPL4-UFD1 AAA ATPase complex |
| VCP-NPL4-UFD1 AAA ATPase complex assembly |
| VCP-NSFL1C complex |
| vegetative bud |
| vegetative cell differentiation |
| vegetative meristem growth |
| vegetative phase change |
| vegetative shoot apex |
| vegetative shoot apical meristem |
| vegetative shoot system |
| vegetative to reproductive phase transition of meristem |
| VEGF-A complex |
| VEGF-A-activated receptor activity |
| VEGF-activated neuropilin signaling pathway |
| VEGF-activated neuropilin signaling pathway involved in axon guidance |
| VEGF-activated platelet-derived growth factor receptor signaling pathway |
| VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway |
| VEGF-activated platelet-derived growth factor receptor-beta signaling pathway |
| VEGF-B-activated receptor activity |
| VEGF-C-activated receptor activity |
| VEGF-D-activated receptor activity |
| VEGF-E-activated receptor activity |
| vein smooth muscle contraction |
| velamen |
| vellosimine dehydrogenase activity |
| venous blood vessel development |
| venous blood vessel morphogenesis |
| venous endothelial cell differentiation |
| venous endothelial cell fate commitment |
| venous endothelial cell migration involved in lymph vessel development |
| venter |
| ventral aorta development |
| ventral aorta morphogenesis |
| ventral canal cell |
| ventral cochlear nucleus development |
| ventral cord development |
| ventral disc |
| ventral disc crossbridge |
| ventral disc dorsal microribbon |
| ventral disc lateral crest |
| ventral disc microtubule array |
| ventral disc overlap zone |
| ventral disc supernumerary microtubule array |
| ventral furrow formation |
| ventral midline determination |
| ventral midline development |
| ventral spinal cord development |
| ventral spinal cord interneuron differentiation |
| ventral spinal cord interneuron fate commitment |
| ventral spinal cord interneuron fate determination |
| ventral spinal cord interneuron specification |
| ventral tegmental area development |
| ventral trunk neural crest cell migration |
| ventricular cardiac muscle cell action potential |
| ventricular cardiac muscle cell development |
| ventricular cardiac muscle cell differentiation |
| ventricular cardiac muscle cell fate commitment |
| ventricular cardiac muscle tissue development |
| ventricular cardiac muscle tissue morphogenesis |
| ventricular cardiac myofibril assembly |
| ventricular compact myocardium morphogenesis |
| ventricular septum development |
| ventricular septum intermedium development |
| ventricular septum intermedium morphogenesis |
| ventricular septum morphogenesis |
| ventricular system development |
| ventricular trabecula myocardium morphogenesis |
| ventricular zone cell fate commitment |
| ventricular zone cell-producing asymmetric radial glial cell division in forebrain |
| ventricular zone neuroblast division |
| ventriculo bulbo valve development |
| ventriculo bulbo valve formation |
| ventriculo bulbo valve morphogenesis |
| verbascose biosynthetic process |
| verbascose metabolic process |
| vernalization response |
| verruculogen biosynthetic process |
| verruculogen catabolic process |
| verruculogen metabolic process |
| versicolorin B synthase activity |
| versicolorin reductase activity |
| very long chain acyl-CoA hydrolase activity |
| very long-chain fatty acid biosynthetic process |
| very long-chain fatty acid catabolic process |
| very long-chain fatty acid metabolic process |
| very long-chain fatty acid-CoA ligase activity |
| very long-chain fatty-acyl-CoA catabolic process |
| very long-chain fatty-acyl-CoA metabolic process |
| very long-chain-3-hydroxyacyl-CoA dehydrogenase activity |
| very-long-chain fatty acyl-CoA oxidase activity |
| very-long-chain-(S)-2-hydroxy-acid oxidase activity |
| very-long-chain-acyl-CoA dehydrogenase activity |
| very-low-density lipoprotein particle |
| very-low-density lipoprotein particle assembly |
| very-low-density lipoprotein particle binding |
| very-low-density lipoprotein particle clearance |
| very-low-density lipoprotein particle receptor activity |
| very-low-density lipoprotein particle receptor binding |
| very-low-density lipoprotein particle remodeling |
| vesicle |
| vesicle coat |
| vesicle coating |
| vesicle docking |
| vesicle docking involved in exocytosis |
| vesicle fusion |
| vesicle fusion with endoplasmic reticulum |
| vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane |
| vesicle fusion with Golgi apparatus |
| vesicle fusion with Golgi cis cisterna membrane |
| vesicle fusion with Golgi medial cisterna membrane |
| vesicle fusion with nuclear membrane involved in mitotic nuclear envelope reassembly |
| vesicle fusion with peroxisome |
| vesicle fusion with vacuole |
| vesicle localization |
| vesicle lumen |
| vesicle membrane |
| vesicle organization |
| vesicle targeting |
| vesicle targeting to fusome |
| vesicle targeting, cis-Golgi to rough ER |
| vesicle targeting, inter-Golgi cisterna |
| vesicle targeting, plasma membrane to endosome |
| vesicle targeting, rough ER to cis-Golgi |
| vesicle targeting, to, from or within Golgi |
| vesicle targeting, trans-Golgi to endosome |
| vesicle tethering involved in exocytosis |
| vesicle transport along actin filament |
| vesicle transport along microtubule |
| vesicle uncoating |
| vesicle-mediated cholesterol transport |
| vesicle-mediated transport |
| vesicle-mediated transport involved in floral organ abscission |
| vesicular hydrogen:amino acid antiporter activity |
| vestibular nucleus development |
| vestibular receptor cell development |
| vestibular receptor cell differentiation |
| vestibular receptor cell fate commitment |
| vestibular receptor cell morphogenesis |
| vestibular receptor cell stereocilium organization |
| vestibular reflex |
| vestibulocochlear nerve development |
| vestibulocochlear nerve formation |
| vestibulocochlear nerve maturation |
| vestibulocochlear nerve morphogenesis |
| vestibulocochlear nerve structural organization |
| vestibulospinal tract morphogenesis |
| vetispiradiene synthase activity |
| vibrational conductance of sound to the inner ear |
| vibriobactin biosynthetic process |
| vibriobactin metabolic process |
| vicianin beta-glucosidase activity |
| vinculin binding |
| vindoline biosynthetic process |
| vindoline catabolic process |
| vindoline metabolic process |
| vinorine hydroxylase activity |
| vinorine synthase activity |
| vinyl chloride reductive dehalogenase activity |
| vinylacetyl-CoA delta-isomerase activity |
| violaceol I biosynthetic process |
| violaceol I catabolic process |
| violaceol I metabolic process |
| violaceol II biosynthetic process |
| violaceol II catabolic process |
| violaceol II metabolic process |
| violaxanthin de-epoxidase activity |
| viomycin kinase activity |
| viral assembly compartment |
| viral assembly intermediate |
| viral budding |
| viral budding from ER membrane |
| viral budding from Golgi membrane |
| viral budding from inner nuclear membrane |
| viral budding from nuclear membrane |
| viral budding from outer nuclear membrane |
| viral budding from plasma membrane |
| viral budding via host ESCRT complex |
| viral capsid |
| viral capsid assembly |
| viral capsid precursor transport to host cell nucleus |
| viral capsid secondary envelopment |
| viral capsid, decoration |
| viral capsid, fiber |
| viral capsid, internal space |
| viral capsid, major subunit |
| viral capsid, minor subunit |
| viral capsid, turret |
| viral DNA cleavage involved in viral genome maturation |
| viral DNA genome packaging |
| viral DNA genome packaging via site-specific sequence recognition |
| viral DNA genome packaging, 3' extended cos packaging |
| viral DNA genome packaging, 5' extended cos packaging |
| viral DNA genome packaging, headful |
| viral DNA genome replication |
| viral DNA repair |
| viral DNA strand displacement replication |
| viral double stranded DNA replication via reverse transcription |
| viral entry into host cell |
| viral entry into host cell via pilus basal pore |
| viral entry into host cell via pilus retraction |
| viral entry into host cell via pilus retraction and membrane fusion |
| viral envelope |
| viral exocytosis |
| viral factory |
| viral gene expression |
| viral gene silencing in virus induced gene silencing |
| viral genome |
| viral genome ejection through host cell envelope |
| viral genome integration into host DNA |
| viral genome maturation |
| viral genome packaging |
| viral genome replication |
| viral head-tail joining |
| viral inner capsid |
| viral inner membrane |
| viral integration complex |
| viral intermediate capsid |
| viral latency |
| viral life cycle |
| viral membrane |
| viral mRNA cap methylation |
| viral mRNA export from host cell nucleus |
| viral nucleocapsid |
| viral occlusion body |
| viral outer capsid |
| viral penetration into host nucleus |
| viral portal complex |
| viral procapsid |
| viral procapsid maturation |
| viral process |
| viral protein processing |
| viral release from host cell |
| viral replication complex |
| viral replication complex formation and maintenance |
| viral RNA editing |
| viral RNA genome packaging |
| viral RNA genome replication |
| viral RNA-directed RNA polymerase complex |
| viral scaffold |
| viral scaffold assembly and maintenance |
| viral tail assembly |
| viral tegument |
| viral terminase complex |
| viral transcription |
| viral transcriptional complex |
| viral translation |
| viral translational frameshifting |
| viral translational readthrough |
| viral translational shunt |
| viral translational termination-reinitiation |
| viral transmission by vector |
| viral triggering of virus induced gene silencing |
| viral-induced premature senescence |
| virion |
| virion assembly |
| virion attachment to host cell |
| virion attachment to host cell pilus |
| virion binding |
| virion membrane |
| virion nucleoid |
| virion part |
| virion transport vesicle |
| virogenic stroma |
| viroplasm viral factory |
| virus baseplate assembly |
| virus induced gene silencing |
| virus maturation |
| virus receptor activity |
| virus tail |
| virus tail fiber assembly |
| virus tail, baseplate |
| virus tail, fiber |
| virus tail, major subunit |
| virus tail, minor subunit |
| virus tail, shaft |
| virus tail, sheath |
| virus tail, tip |
| virus tail, tube |
| virus terminase, large subunit |
| visceral mesoderm-endoderm interaction involved in midgut development |
| visceral motor neuron differentiation |
| visceral muscle development |
| visceral peritoneum development |
| visceral serous pericardium development |
| vistamycin biosynthetic process |
| vistamycin catabolic process |
| vistamycin metabolic process |
| visual behavior |
| visual learning |
| visual perception |
| visual perception involved in equilibrioception |
| vitamin A biosynthetic process |
| vitamin A import |
| vitamin A metabolic process |
| vitamin A transport |
| vitamin B6 binding |
| vitamin B6 biosynthetic process |
| vitamin B6 catabolic process |
| vitamin B6 metabolic process |
| vitamin B6 transport |
| vitamin B6 transporter activity |
| vitamin binding |
| vitamin biosynthetic process |
| vitamin catabolic process |
| vitamin D 24-hydroxylase activity |
| vitamin D 25-hydroxylase activity |
| vitamin D binding |
| vitamin D biosynthetic process |
| vitamin D catabolic process |
| vitamin D metabolic process |
| vitamin D receptor activator activity |
| vitamin D receptor binding |
| vitamin D receptor signaling pathway |
| vitamin D response element binding |
| vitamin D2 metabolic process |
| vitamin D3 25-hydroxylase activity |
| vitamin D3 biosynthetic process |
| vitamin D3 catabolic process |
| vitamin D3 metabolic process |
| vitamin D4 metabolic process |
| vitamin D5 metabolic process |
| vitamin E binding |
| vitamin E biosynthetic process |
| vitamin E metabolic process |
| vitamin K biosynthetic process |
| vitamin K catabolic process |
| vitamin K metabolic process |
| vitamin metabolic process |
| vitamin transmembrane transport |
| vitamin transmembrane transporter activity |
| vitamin transport |
| vitamin transporter activity |
| vitamin-K-epoxide reductase (warfarin-insensitive) activity |
| vitamin-K-epoxide reductase (warfarin-sensitive) activity |
| vitelline envelope |
| vitelline membrane formation |
| vitelline membrane formation involved in chorion-containing eggshell formation |
| vitellogenesis |
| vitellogenin receptor activity |
| vitexin 2''-O-rhamnoside 7-O-methyltransferase activity |
| vitexin beta-glucosyltransferase activity |
| Vma12-Vma22 assembly complex |
| vocal learning |
| vocalization behavior |
| voltage-gated anion channel activity |
| voltage-gated calcium channel activity |
| voltage-gated calcium channel activity involved in AV node cell action potential |
| voltage-gated calcium channel activity involved in bundle of His cell action potential |
| voltage-gated calcium channel activity involved in cardiac muscle cell action potential |
| voltage-gated calcium channel activity involved in Purkinje myocyte cell action potential |
| voltage-gated calcium channel activity involved SA node cell action potential |
| voltage-gated calcium channel complex |
| voltage-gated calcium channel complex assembly |
| voltage-gated cation channel activity |
| voltage-gated channel activity |
| voltage-gated chloride channel activity |
| voltage-gated ion channel activity |
| voltage-gated potassium channel activity |
| voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization |
| voltage-gated potassium channel activity involved in AV node cell action potential repolarization |
| voltage-gated potassium channel activity involved in bundle of His cell action potential repolarization |
| voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization |
| voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization |
| voltage-gated potassium channel activity involved in SA node cell action potential depolarization |
| voltage-gated potassium channel activity involved in SA node cell action potential repolarization |
| voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization |
| voltage-gated potassium channel complex |
| voltage-gated proton channel activity |
| voltage-gated sodium channel activity |
| voltage-gated sodium channel activity involved in AV node cell action potential |
| voltage-gated sodium channel activity involved in bundle of His cell action potential |
| voltage-gated sodium channel activity involved in cardiac muscle cell action potential |
| voltage-gated sodium channel activity involved in Purkinje myocyte action potential |
| voltage-gated sodium channel activity involved in SA node cell action potential |
| voltage-gated sodium channel complex |
| voltage-gated sulfate antiporter activity |
| volume-sensitive anion channel activity |
| volume-sensitive chloride channel activity |
| voluntary musculoskeletal movement |
| voluntary skeletal muscle contraction |
| vomifoliol 4'-dehydrogenase activity |
| vomilenine glucosyltransferase activity |
| vomilenine reductase activity |
| Vps4-Vta1 complex |
| Vps55/Vps68 complex |
| VRK3/VHR/ERK complex |
| vulval cell fate commitment |
| vulval cell fate determination |
| vulval cell fate specification |
| vulval development |
| vulval location |
| W chromosome |
| walking behavior |
| wall teichoic acid biosynthetic process |
| wall teichoic acid catabolic process |
| wall teichoic acid metabolic process |
| WASH complex |
| Watasenia-luciferin 2-monooxygenase activity |
| water binding |
| water channel activity |
| water homeostasis |
| water transmembrane transporter activity |
| water transport |
| water-soluble vitamin biosynthetic process |
| water-soluble vitamin catabolic process |
| water-soluble vitamin metabolic process |
| wax biosynthetic process |
| wax metabolic process |
| wax-ester hydrolase activity |
| WD40-repeat domain binding |
| Weibel-Palade body |
| white fat cell differentiation |
| white fat cell differentiation involved in mammary gland fat development |
| white fat cell proliferation |
| whole membrane |
| whole plant |
| whole plant development stage |
| whole plant flowering stage |
| whole plant fruit development stage |
| whole plant fruit formation stage |
| whole plant fruit formation stage 10 to 30% |
| whole plant fruit formation stage 30 to 50% |
| whole plant fruit formation stage 50 to 70% |
| whole plant fruit formation stage 70% to final size |
| whole plant fruit formation stage up to 10% |
| whole plant fruit ripening complete stage |
| whole plant fruit ripening stage |
| whole plant inflorescence detectable stage |
| WICH complex |
| wide pore channel activity |
| wing and notum subfield formation |
| wing cell fate specification |
| wing disc anterior/posterior pattern formation |
| wing disc development |
| wing disc dorsal/ventral pattern formation |
| wing disc morphogenesis |
| wing disc pattern formation |
| wing disc proximal/distal pattern formation |
| wing petal |
| wishful thinking binding |
| W-molybdopterin cofactor biosynthetic process |
| W-molybdopterin cofactor catabolic process |
| W-molybdopterin cofactor metabolic process |
| Wnt protein secretion |
| Wnt receptor catabolic process |
| Wnt receptor internalization |
| Wnt receptor recycling |
| Wnt signaling pathway |
| Wnt signaling pathway involved in animal/vegetal axis specification |
| Wnt signaling pathway involved in digestive tract morphogenesis |
| Wnt signaling pathway involved in dorsal/ventral axis specification |
| Wnt signaling pathway involved in forebrain neuroblast division |
| Wnt signaling pathway involved in heart development |
| Wnt signaling pathway involved in kidney development |
| Wnt signaling pathway involved in mammary gland specification |
| Wnt signaling pathway involved in primitive streak formation |
| Wnt signaling pathway involved in regulation of cell proliferation in dorsal spinal cord |
| Wnt signaling pathway involved in somitogenesis |
| Wnt signaling pathway involved in wound healing, spreading of epidermal cells |
| Wnt signaling pathway, calcium modulating pathway |
| Wnt signaling pathway, planar cell polarity pathway |
| Wnt signaling pathway, regulating spindle positioning |
| Wnt signalosome |
| Wnt signalosome assembly |
| Wnt-activated receptor activity |
| Wnt-activated signaling pathway involved in forebrain neuron fate commitment |
| Wnt-protein binding |
| wobble base cytosine methylation |
| wobble base lysidine biosynthesis |
| wobble position cytosine ribose methylation |
| wobble position guanine ribose methylation |
| wobble position ribose methylation |
| wobble position uridine ribose methylation |
| wound healing |
| wound healing involved in inflammatory response |
| wound healing, spreading of cells |
| wound healing, spreading of epidermal cells |
| WW domain binding |
| wybutosine biosynthetic process |
| wybutosine metabolic process |
| X chromosome |
| X chromosome located dosage compensation complex, transcription activating |
| X11-like protein binding |
| xanthan lyase activity |
| xanthine biosynthetic process |
| xanthine catabolic process |
| xanthine dehydrogenase activity |
| xanthine dehydrogenase complex |
| xanthine DNA N-glycosylase activity |
| xanthine hydrolase activity |
| xanthine metabolic process |
| xanthine oxidase activity |
| xanthine oxidation |
| xanthine phosphoribosyltransferase activity |
| xanthine transmembrane transporter activity |
| xanthine transport |
| xanthommatin reductase activity |
| xanthone-containing compound biosynthetic process |
| xanthone-containing compound metabolic process |
| xanthophore |
| xanthophore differentiation |
| xanthophyll binding |
| xanthophyll biosynthetic process |
| xanthophyll catabolic process |
| xanthophyll cycle |
| xanthophyll metabolic process |
| xanthosine biosynthetic process |
| xanthosine catabolic process |
| xanthosine metabolic process |
| xanthosine nucleotidase activity |
| xanthosine transmembrane transporter activity |
| xanthosine transport |
| xanthosine:hydrogen ion symporter activity |
| xanthoxin dehydrogenase activity |
| XCR1 chemokine receptor binding |
| XDP catabolic process |
| XDP phosphatase activity |
| xenobiotic catabolic process |
| xenobiotic glucuronidation |
| xenobiotic metabolic process |
| xenobiotic transport |
| xenobiotic transporter activity |
| xenobiotic-transporting ATPase activity |
| xenon atom binding |
| xenophagy |
| XMP biosynthetic process |
| XMP metabolic process |
| XMP salvage |
| XPC complex |
| XRCC2-RAD51D complex |
| XTP binding |
| XTP diphosphatase activity |
| XY body |
| xylan 1,3-beta-xylosidase activity |
| xylan 1,4-beta-xylosidase activity |
| xylan alpha-1,2-glucuronosidase activity |
| xylan binding |
| xylan biosynthetic process |
| xylan catabolic process |
| xylan endo-1,3-beta-xylosidase activity |
| xylan metabolic process |
| xylan O-acetyltransferase activity |
| xylanase activity |
| xylanosome |
| xylem |
| xylem and phloem pattern formation |
| xylem development |
| xylem development stage |
| xylem element |
| xylem fiber cell |
| xylem pole pericycle cell |
| xylem sap |
| xylem vessel |
| xylem vessel member |
| xylem vessel member cell differentiation |
| xylem-to-phloem iron transport |
| xylene catabolic process |
| xylene metabolic process |
| xylene monooxygenase activity |
| xylitol export |
| xylitol kinase activity |
| xylitol oxidase activity |
| xylitol transport |
| xylogalacturonan metabolic process |
| xyloglucan 1,6-alpha-xylosidase activity |
| xyloglucan 4-glucosyltransferase activity |
| xyloglucan 6-xylosyltransferase activity |
| xyloglucan biosynthetic process |
| xyloglucan catabolic process |
| xyloglucan endotransglucosylase activity |
| xyloglucan metabolic process |
| xyloglucan:xyloglucosyl transferase activity |
| xyloglucan-specific endo-beta-1,4-glucanase activity |
| xyloglucan-specific exo-beta-1,4-glucanase activity |
| xylonate dehydratase activity |
| xylono-1,4-lactonase activity |
| xylose binding |
| xylose catabolic process to ethanol |
| xylose isomerase activity |
| xylosylprotein 4-beta-galactosyltransferase activity |
| xylosyltransferase activity |
| xylotriose transport |
| xylulokinase activity |
| xylulose 5-phosphate biosynthetic process |
| xylulose 5-phosphate metabolic process |
| xylulose biosynthetic process |
| xylulose catabolic process |
| xylulose metabolic process |
| Y chromosome |
| Yb body |
| yeast-form cell wall |
| Y-form DNA binding |
| yolk |
| yolk granule |
| yolk plasma |
| Y-shaped link |
| Z chromosome |
| Z disc |
| zeatin 9-aminocarboxyethyltransferase activity |
| zeatin biosynthetic process |
| zeatin metabolic process |
| zeatin O-beta-D-xylosyltransferase activity |
| zeatin reductase activity |
| zeaxanthin biosynthetic process |
| zeaxanthin bis(beta-D-glucoside) biosynthetic process |
| zeaxanthin bis(beta-D-glucoside) catabolic process |
| zeaxanthin bis(beta-D-glucoside) metabolic process |
| zeaxanthin catabolic process |
| zeaxanthin epoxidase [overall] activity |
| zeaxanthin epoxidase activity |
| zeaxanthin metabolic process |
| zeinoxanthin epsilon hydroxylase activity |
| zeta DNA polymerase complex |
| Z-farnesyl diphosphate synthase activity |
| zf-TRAF domain binding |
| zf-TRAF domain-mediated complex assembly |
| zinc D-Ala-D-Ala carboxypeptidase activity |
| zinc efflux active transmembrane transporter activity |
| zinc efflux transmembrane transporter activity |
| zinc II ion import across Golgi membrane |
| zinc II ion transmembrane import |
| zinc II ion transmembrane transport |
| zinc II ion transport |
| zinc ion binding |
| zinc ion homeostasis |
| zinc ion transmembrane transporter activity |
| zinc potentiation of synaptic transmission, glycinergic |
| zinc transporting ATPase activity |
| zinc-exporting ATPase activity |
| zona limitans intrathalamica formation |
| zona pellucida receptor complex |
| zonula adherens |
| zonula adherens assembly |
| zonula adherens maintenance |
| zoospore encystment on host |
| zoospore formation |
| zoospore movement on or near host |
| Z-phenylacetaldoxime biosynthetic process |
| Z-phenylacetaldoxime catabolic process |
| Z-phenylacetaldoxime metabolic process |
| zygosporangium development |
| zygospore formation |
| zygote asymmetric cell division |
| zygote asymmetric cytokinesis in embryo sac |
| zygote elongation |
| zygotene |
| zygotic determination of anterior/posterior axis, embryo |
| zygotic plant embryo |
| zygotic specification of dorsal/ventral axis |
| zymogen activation |
| zymogen activation in other organism |
| zymogen binding |
| zymogen granule |
| zymogen granule exocytosis |
| zymogen granule membrane |
| zymogen inhibition |
| zymosterol biosynthetic process |
| zymosterol metabolic process |


‘I don’t regret moving to Juventus’
by Editor– Matthijs De Ligt hits back at Kluivert
Juventus defender Matthijs de Ligt has hit back at claims from Holland legend Patrick Kluivert that he regrets leaving Ajax for Serie A giants Juventus.
De Ligt has played all but three Serie A matches this season but came in for criticism after Juve’s draw with Atletico Madrid in the Champions League, while the Italian press has also been quick to suggest he has not recaptured last season’s Ajax form.
But the 20-year-old De Ligt insists he is happy with his start to life in Italy.
‘I don’t regret the fact that I have moved to Juventus,’ the 21-year-old told Voetbal Primeur. ‘They are saying and writing a lot of stuff.
‘If a person like Kluivert says something like that, it might seem true, but it really is just his assumption.’
Barcelona academy director Kluivert, speaking to Mundo Deportivo, had said about his compatriot: ‘I didn’t personally try to convince him about joining Barcelona.
‘I only told him about the positive aspects of Barcelona as a club and city.
‘We are obviously talking about a great defender and in the end he made a choice. I think he slightly regrets it now, but that’s the way it is.
‘In life, you must make choices, sometimes good ones and sometimes bad. You have to learn from your decisions.’
De Ligt decided to join Juventus ahead of the likes of Barcelona, Manchester United and Paris Saint-Germain last summer after his stock had risen at Ajax.
His former team-mate and close friend Frenkie de Jong took up Barcelona’s offer but De Ligt turned down the opportunity to follow.
The young defender has made 12 competitive appearances for the Old Lady since his £67.8million move from his native Holland.
Juventus are unbeaten in 12 Serie A matches so far this season and resume domestic action against Atalanta tomorrow.


One of the benefits of Docker, is that resources are dynamically allocated. In other words, resources are only allocated as needed.
Below you will find a tutorial on how to install an Apache web-hosting server on a Docker image. The tutorial assumes you have Docker installed and have opened a Powershell or Terminal Prompt, but will walk you through all other required steps.
To install Ubuntu run the "docker pull ubuntu" command as seen below.
This will pull the latest Ubuntu image from Docker and install a blank Ubuntu image within a new container image. The creation of this new image can be verified by running the "docker images" command seen below.
This command shows us all Docker images present but in this case we are specifically looking to verify the presence of the "ubuntu" Repository that has the "latest" Tag.
Finally, we can launch the newly created Ubuntu image via the "docker run -it ubuntu:latest /bin/bash" command below.
This command will launch the newly created container image, ubuntu:latest (repositoryName:tagName), at the /bin/bash directory within the image.
Before we install Apache itself, we will want to make sure all of the packages pre-installed in the Ubuntu image are up to date. To do this, we will run the "apt-get update" command.
This will go through and automatically update any packages that need updates. Once that is complete, we can actually install the two packages we need. First will be "apt-get install apache2" command.
Next we will install the VIM text editor via the "apt-get install vim" command.
At this point, we now have all of the required tools to run our own webserver. If you would like to learn how to commit a snapshot of the environment as it exists as a separate container, please continue to read the Optional section below. If you would like to continue on without this, please proceed to Step 3.
Whichever path you prefer, type the exit command to continue.
To commit your ubuntu repository to a new image, you will want to first verify the current image Container ID. To this do, run the "docker ps -a" command.
In the example above, the Container ID is 6ab705341f04. We can now run the following command to
create a new repository:
"docker commit [containerID] [repositoryName]"
In the example above, the Container ID is still 6ab705341f04 and the new Repository Name is ubuntu-my_apache2.
To mount a local storage location to your Ubuntu container, you will want to run the following command:
"docker run -it -p <IP_ADDRESS>:80:80 -v [localFilePath]:/var/www/html [repositoryName] /bin/bash"
As you may notice, there are two very important parameters in the command that are within brackets, [], labeled localFilePath and repositoryName. These variables will be dependant on your local file system and the Docker repository name that you have chosen.
If you have not completed the Optional step in Step 2, your repository name will be ubuntu.
If you have completed the Optional step in Step 2, you will want to use your new Repository Name.
In the example command above, the important variables are as follows:
localFilePath: C:\Users\rnunes\Documents\NJIT\IS601\DockerFolder
repositoryName: ubuntu-my_apache2
At this point you can add HTML files to your local storage location using any type of file explorer. Once HTML files are present on your local storage location folder, you can run the following command to start your Apache Webserver: "service apache2 start"
Now you can open a web browser on your local machine and navigate to <IP_ADDRESS> (your local host) to verify everything is running.
Optionally, if you do now yet have any HTML files but would like to verify that your Apache Webserver is running, we can create a temporary index.html file.
First, navigate to the appropriate file location with the "cd /var/www/html/" command.
Now that we are in the appropriate location, we can open the VIM text editor with the "vi index.html" command.
Press the "i" key to enter Insert Mode. You should see "-- INSERT --" across the bottom of the screen. Once in Insert Mode, you can now enter the following HTML code.
Feel free to change the title and h1 text anything you desire. Whenever the file is complete, press the "ESC" key to exit Insert Mode. Type ":wq" to write to file and quit the VIM editor.
You can run the following command to start your Apache Webserver: "service apache2 start"
Now you can open a web browser on your local machine and navigate to <IP_ADDRESS> (your local host) to verify everything is running.
If you need to update your index.html file you should be able to open the locally saved file using any editor like NotePad++.


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Here's the link to try out version 3.0: http://arohatgi.info/WebPlotDigitizer/beta.
This will be kept as a "beta" for a couple of weeks just to make sure there aren't any issues that I might have overlooked. Also, this gives me some time to put together a few tutorials and update the user manual etc. Checkout the demo video in the previous post - it should help in getting started.
Feedback is highly appreciated!


sceptre-on-moderately-sized-data.Rmd
This tutorial shows how to run sceptre
on a dataset of moderate size. The data should fit into memory and be small enough such that the analysis can run on a single machine (as opposed to a computer cluster). To keep the size of the package small, we generate synthetic data rather than use real data.
First, we generate a gene-by-cell expression matrix and a binary gRNA-by-cell perturbation matrix. We use 40 genes, 50 gRNAs, and 5000 cells. Genes and gRNAs are put in rows, and cells are put in columns, as is standard in single-cell analysis.
set.seed(4)
# n genes, gRNAs, and cells
n_genes <- 40
n_gRNAs <- 50
n_cells <- 5000
# gene expression matrix
expression_matrix <- replicate(n = n_genes, rpois(n_cells, 1)) %>% t()
# perturbation matrix
perturbation_matrix <- replicate(n = n_gRNAs, rbinom(n_cells, 1, 0.05)) %>% t()
The “expression” and “perturbation” matrices must have row names corresponding to the genes and gRNAs, respectively. We assign simple names to each.
row.names(expression_matrix) <- paste0("gene", seq(1, nrow(expression_matrix)))
row.names(perturbation_matrix) <- paste0("gRNA", seq(1, nrow(perturbation_matrix)))
Finally, for each cell, we simulate its sequencing batch: “batch 1” or “batch 2.”
On a real dataset we would perform quality control at this stage. For example, we would remove cells with 0 perturbations. We recommend doing minimal quality control, as sceptre
is robust and can handle unusual gene expression distributions and misspecified expression models.
Next, we compute the cell-specific covariate matrix. The following covariates are reasonable to include:
In this simple tutorial we will use (1) and (3). First, we compute the log-transformed mRNA UMI counts.
Next, we create the cell-specific covariate matrix, putting cells in rows and covariates in columns.
covariate_matrix <- data.frame(lg_mRNA_lib_size = lg_mRNA_lib_size,
batch = factor(batch))
After this, we select the gene-gRNA pairs to analyze. If we were conducting a cis analysis, we might pair each gene with all gRNAs targeting within 1Mb of the gene’s transcription start site. For simplicity, we will randomly sample 90 gene-gRNA pairs. The data frame that we create, gene_gRNA_pairs
, should have one column called gene_id
and a second column called gRNA_id
.
gene_gRNA_pairs <- expand.grid(gene_id = row.names(expression_matrix),
gRNA_id = row.names(perturbation_matrix)) %>% slice_sample(n = 90)
sceptre
The final step is to run sceptre
. We use the function run_sceptre_in_memory
, which, as the name suggests, runs sceptre
on in-memory expression and perturbation matrices. Notice that we did not “normalize” the gene expression data at any step; sceptre
operates on raw UMI count matrices.
run_sceptre_in_memory
takes several arguments, which we summarize below.
storage_dir
: the name of a directory in which to store the intermediate computations and final results.
expression_matrix
: the gene-by-cell expression data, represented as an R matrix. The names of the rows should be the gene names.
perturbation_matrix
: the gRNA-by-cell perturbation data, represented as an R matrix. The names of the rows should be the gRNA names.
covariate_matrix
: the matrix of cell-specific covariates, represented as a data frame. The rows correspond to cells, and the columns to the covariates.
gene_gRNA_pairs
: a data frame storing the gene-gRNA pairs to analyze. The data frame must contain columns named gene_id
and gRNA_id
, with entries corresponding to the row names of expression_matrix
and perturbation_matrix
.
side
: the sidedness of the test: one of “left,” “right,” and “both.” “left” is appropriate when perturbations are expected to decrease the expression of genes.
pod_sizes
: an integer vector giving the size of the “gene”, “gRNA”, and “pair” pods. run_sceptre_in_memory
groups genes, gRNAs, and gene-gRNA pairs into distinct “pods” and runs computations on these pods in parallel. Smaller pod sizes give rise to greater parallelization. pod_sizes
should be an integer vector of length three, with values giving the pod sizes and names “gene,” “gRNA,” and “pair.”
regularization_amount
: the amount of regularization to apply to the estimated negative binomial size parameters, where 0 corresponds to no regularization at all. The default option is 0.1.
B
: the number of random samples to draw in the conditional randomization test. The default option is 500.
seed
: seed to pass to the random number generator. The default value is 4.
We define storage_dir
, side
, and pod_sizes
, which we have not yet set. We will use the default options for the remaining parameters.
We have set storage_dir
to tempdir
for the sake of portability; in general, you should choose a more meaningful directory to store the intermediate computations and final results.
Finally, we call the function.
result <- run_sceptre_in_memory(storage_dir,
expression_matrix,
perturbation_matrix,
covariate_matrix,
gene_gRNA_pairs,
side,
pod_sizes)
#> [1] "Note: check the `log` subdirectory of the storage directory /var/folders/ld/cr_qbh356bs51ss_8ts23syr0000gn/T//RtmpUJiVLQ for updates!"
As the function runs, we can check the logs
subdirectory of the storage directory to monitor progress.
# in terminal
cd /var/folders/h6/pt59hmwd7rqb3jqfzwh0hlth0000gn/T//RtmpUfO717 # update path
cd logs
This function takes about 5 minutes to execute on a Macbook Pro laptop with four Intel Core i5 processors.
Let’s examine the results (which also have been written to the results
subdirectory of the storage directory).
head(result)
#> gene_id gRNA_id p_value skew_t_fit_success xi omega alpha
#> 1 gene3 gRNA37 0.4122104 TRUE -0.4928713 0.9804951 0.5709883
#> 2 gene22 gRNA8 0.1459034 TRUE -0.2202602 0.8361726 0.1272744
#> 3 gene12 gRNA6 0.1554211 TRUE -0.2156716 0.8643593 0.2175973
#> 4 gene27 gRNA27 0.6319403 TRUE -0.3430067 0.8727603 0.3304092
#> 5 gene35 gRNA36 0.7990196 TRUE -0.4294733 0.9114994 0.4709964
#> 6 gene15 gRNA11 0.4710990 TRUE 0.2001623 0.8559170 -0.2887997
#> nu z_value n_successful_resamples
#> 1 6.333383 -0.30240352 500
#> 2 5.118402 -1.09854699 499
#> 3 5.293119 -1.00052175 500
#> 4 5.241553 0.18927850 500
#> 5 6.349938 0.68567762 500
#> 6 4.840431 -0.06262772 499
The data frame contains the following columns:
gene_id
: the ID of the gene
gRNA_id
: the ID of the gRNA
p_value
: the gRNA-to-gene p-value
skew_t_fit_success
: boolean indicating whether the skew-t fit was successful (if not, the empirical conditional randomization test p-value is returned)
xi
, omega
, alpha
, nu
: parameters of the fitted skew-t distribution
z_value
: the z-score of the negative binomial regression on the observed (i.e., non-resampled) data. The sign z_value
gives the direction of the effect.
n_successful_resamples
: the number of resamples in the conditional randomization test that were succesful
We might want to apply a Benjamini-Hochberg correction to account for multiple hypothesis testing, but be sure to proceed with caution here.
result$p_value_adj <- p.adjust(p = result$p_value, method = "BH")
At this point we have finished our analysis!


This section of the application shows how to search for, add and remove friends from the user's networks.


Object detection
There are some popular paper about object detection. I briefly introduce them here so that I can review quickly in the future.
Will be updated constantly.
ATSS
Original paper ‘‘Bridging the Gap Between Anchor-based and Anchor-free Detection via Adaptive Training Sample Selection’’. Original ATSS paper see here.
Key features:
1.One-stage (i.e. proposal-free) anchor based detector.
2.This paper conduct a lot of ablation experiments to study why there is gap between anchor-based and anchor-free detectors. It uses RetinaNet and FCOS as the example to conduct experiments. By those experiments, the authors found that tiling multiple different size anchors in each location is unnecessary. And the authors think that how to define positive and negative training samples is the essential difference between anchor-based and anchor-free detectors.
3.This paper also gives a nice summary for related object detection works.
4.Based on IOU statistic, the author proposes an adaptive training sample selection strategy which automatically decide what samples should be positive and negative with almost hyperparameter-free.
FCOS
Original paper ‘‘FCOS: Fully Convolutional One-Stage Object Detection’’. Original FCOS paper see here.
Key features:
1.Proposal free and anchor free. FCOS is an one-stage object detector without anchors. The authors point out that the anchor is an heuristic which is hard to tune hyperparameters. Without anchor, FCOS avoids a lot of hyperparameters tuning and complicated IOU calculation.
2.Since there is no anchor, FCOS uses keypoints (i.e. feature map pixels reproject to original image) to regress bounding box. To overcome box overlap ambiguity, it arranges the regression size to different feature pyramids.
3.It proposes a centerness branch to filter out low-quality predicted boxes whose locations are far away from the center of ground-truth objects.
RetinaNet
Original paper ‘‘Focal Loss for Dense Object Detection’’. Original RetinaNet paper see here.
Key features:
1.One-stage (i.e. proposal-free) anchor-based detector. Proposal-free means that it doesn’t require bounding box proposals (candidates). Instead, it directly predicts from feature map (feature pixels).
2.It notices that the massive easy samples can dominate loss optimization (although the loss of easy samples is small, the sum of all easy sample losses is big). It proposes the focal loss for addressing the positive and negative imbalance problem. Note that the imbalance problem is not new in object detection. In fact, other one-stage detectors like SSD apply hard example mining and heuritsic thresholds to address this problem.
3.The authors also propose RetinaNet architecture.
YOLO
Original paper ‘‘You Only Look Once: Unified, Real-Time Object Detection’’. Original YOLO paper see here.
YOLO has multiple versions. I introduce the original version (i.e. YOLOv1).
Key features:
1.One-stage anchor-free detector.
2.Divide image to several cells. Predict and regress from feature map pixels directly.
SSD
Original paper ‘‘SSD: Single Shot MultiBox Detector’’. Original SSD paper see here.
Key features:
1.One-stage anchor-based detector.
2.It predicts and regresses from different feature map levels.
Faster R-CNN
Original paper ‘‘Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks’’. Original Faster R-CNN paper see here.
Key features:
1.Two-stage anchor-based detector.
2.It proposes region proposal network (RPN)
3.Another paper ‘‘Feature Pyramid Networks for Object Detection’’ proposes FPN based on Faster-RCNN.
Mask R-CNN
Original paper ‘‘Mask R-CNN’’. Original Mask R-CNN paper see here.
Key features:
1.Two-stage anchor-based detector.
2.It is similar with Faster-RCNN, but it is with FPN and add a mask branch (i.e. semantic segmentation branch).
3.It proposes RoI align technique instead of RoI pooling.


{% extends "layout.html" %} {% block page_title %} GOV.UK prototype kit {% endblock %} {% block content %} Components GOV.UK PaaS Request an account Back Create a new organisation Your full name Your email address Must be from a government organisation The name of your government department or agency The name of the service or team that you work on If you’re not working on a service please tell us the name of your team or what you want to use your trial account for {% endblock %}