Split (2)

train · 200 rows

question stringlengths 39 56	options listlengths 4 4	answer stringlengths 2 12	query_type stringclasses 3 values	target_type stringclasses 3 values	query_value stringlengths 2 14	correct_value stringlengths 2 12	abstracts listlengths 3 3
Which class belongs to the subfamily 'LTR50'?	[ "LTR", "DNA", "SINE", "LINE" ]	LTR	Subfamily	Class	LTR50	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'LTR50' belong to?	[ "TcMar-Tigger", "ERVL", "L1", "DNA" ]	ERVL	Subfamily	Family	LTR50	ERVL	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the family 'ERVK'?	[ "LINE", "LTR", "SINE", "DNA" ]	LTR	Family	Class	ERVK	LTR	[ "The human genome harbors numerous distinct families of so-called human endogenous retroviruses (HERV) which are remnants of exogenous retroviruses that entered the germ line millions of years ago. We describe here the hitherto little-characterized betaretrovirus HERV-K(HML-5) family (named HERVK22 in Repbase) in g...
Which family does the subfamily 'MER119' belong to?	[ "ERVL-MaLR", "DNA", "hAT-Tip100", "hAT-Charlie" ]	hAT-Charlie	Subfamily	Family	MER119	hAT-Charlie	[ "We report a new medium reiteration frequency repeat MER53 present in human and mammalian genomes. A 189 bp MER53 consensus sequence has been reconstructed based on the computer analysis of GenBank sequences. TA target site duplication and terminal inverted repeats indicate that the MER53 repeat is a non-autonomous...
Which family does the class 'LTR' belong to?	[ "DNA", "ERV1", "ERVL-MaLR", "ERVL" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'ERV1'?	[ "LTR28", "MER91B", "LTR10F", "LTR60" ]	LTR10F	Family	Subfamily	ERV1	LTR10F	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which class belongs to the subfamily 'HERVI-int'?	[ "SINE", "LTR", "DNA", "LINE" ]	LTR	Subfamily	Class	HERVI-int	LTR	[ "Herves is a functional Class II transposable element in Anopheles gambiae belonging to the hAT superfamily of elements. Class II transposable elements are used as gene vectors in this species and are also being considered as genetic drive agents for spreading desirable genes through natural populations as part of ...
Which class belongs to the subfamily 'MER52C'?	[ "DNA", "LTR", "LINE", "SINE" ]	LTR	Subfamily	Class	MER52C	LTR	[ "We report a new medium reiteration frequency repeat MER53 present in human and mammalian genomes. A 189 bp MER53 consensus sequence has been reconstructed based on the computer analysis of GenBank sequences. TA target site duplication and terminal inverted repeats indicate that the MER53 repeat is a non-autonomous...
Which subfamily does the class 'LTR' belong to?	[ "MER66C", "LTR41", "HERVKC4-int", "MamGypLTR3" ]	LTR41	Class	Subfamily	LTR	LTR41	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'hAT-Tip100'?	[ "MLT1K-int", "ORSL-2a", "HERVH48-int", "MER91A" ]	ORSL-2a	Family	Subfamily	hAT-Tip100	ORSL-2a	[ "Tip100 is an Ac-like transposable element that belongs to the hAT superfamily. First discovered in Ipomoea purpurea (common morning glory), it was classified as an autonomous element capable of movement within the genome. As Tip100 data were already available in databases, the sequences of related elements in ten ...
Which family does the class 'LTR' belong to?	[ "Gypsy", "ERV1", "hAT-Tip100", "ERVL" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'HERVL40-int' belong to?	[ "ERV1", "hAT-Charlie", "ERVL-MaLR", "ERVL" ]	ERVL	Subfamily	Family	HERVL40-int	ERVL	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the class 'LTR' belong to?	[ "L1", "hAT-Tip100", "ERV1", "DNA" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'ERV1'?	[ "MamGypsy2-LTR", "LTR16A2", "LTR60B", "LTR1" ]	LTR1	Family	Subfamily	ERV1	LTR1	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which class belongs to the family 'hAT-Charlie'?	[ "DNA", "LTR", "LINE", "SINE" ]	DNA	Family	Class	hAT-Charlie	DNA	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which subfamily does the class 'LTR' belong to?	[ "LTR50", "LTR41B", "HERVIP10F-int", "MLT1L-int" ]	LTR50	Class	Subfamily	LTR	LTR50	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'ERV1'?	[ "LTR28", "LTR4", "HERVS71-int", "LTR50" ]	LTR4	Family	Subfamily	ERV1	LTR4	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the class 'DNA' belong to?	[ "ERVK", "hAT-Charlie", "hAT-Tip100", "DNA" ]	hAT-Tip100	Class	Family	DNA	hAT-Tip100	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which family does the class 'DNA' belong to?	[ "hAT-Tip100", "ERVL", "Alu", "TcMar-Tigger" ]	hAT-Tip100	Class	Family	DNA	hAT-Tip100	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily does the class 'LTR' belong to?	[ "HERV15-int", "AluYh7", "LTR22A", "LTR41" ]	LTR22A	Class	Subfamily	LTR	LTR22A	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the family 'hAT-Tip100'?	[ "DNA", "LTR", "LINE", "SINE" ]	DNA	Family	Class	hAT-Tip100	DNA	[ "Tip100 is an Ac-like transposable element that belongs to the hAT superfamily. First discovered in Ipomoea purpurea (common morning glory), it was classified as an autonomous element capable of movement within the genome. As Tip100 data were already available in databases, the sequences of related elements in ten ...
Which class belongs to the family 'hAT-Tip100'?	[ "DNA", "SINE", "LTR", "LINE" ]	DNA	Family	Class	hAT-Tip100	DNA	[ "Tip100 is an Ac-like transposable element that belongs to the hAT superfamily. First discovered in Ipomoea purpurea (common morning glory), it was classified as an autonomous element capable of movement within the genome. As Tip100 data were already available in databases, the sequences of related elements in ten ...
Which class belongs to the subfamily 'MER88'?	[ "LINE", "SINE", "DNA", "LTR" ]	LTR	Subfamily	Class	MER88	LTR	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which family does the class 'LTR' belong to?	[ "ERV1", "L1", "ERVL", "hAT-Charlie" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LTR' belong to?	[ "Alu", "ERV1", "ERVL-MaLR", "hAT-Charlie" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the subfamily 'LTR41C'?	[ "DNA", "SINE", "LTR", "LINE" ]	LTR	Subfamily	Class	LTR41C	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'ERVL-MaLR'?	[ "MER102a", "MER91C", "LTR36", "MLT1K-int" ]	MLT1K-int	Family	Subfamily	ERVL-MaLR	MLT1K-int	[ "Although the ERVL-mammalian-apparent LTR retrotransposons (MaLRs) are the fourth largest family of transposable elements in the human genome, their evolutionary history and relationship have not been thoroughly studied. In this study, through RepeatMasker annotations of some representative species and construction...
Which class belongs to the family 'hAT-Charlie'?	[ "LTR", "SINE", "DNA", "LINE" ]	DNA	Family	Class	hAT-Charlie	DNA	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which subfamily does the class 'LTR' belong to?	[ "MERX", "HUERS-P3-int", "LTR41", "HUERS-P2-int" ]	HUERS-P3-int	Class	Subfamily	LTR	HUERS-P3-int	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'LTR41' belong to?	[ "ERV1", "ERVL-MaLR", "ERVL", "TcMar-Tigger" ]	ERVL	Subfamily	Family	LTR41	ERVL	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'LTR' belong to?	[ "MER91C", "LTR28C", "HUERS-P3-int", "HERVIP10F-int" ]	HUERS-P3-int	Class	Subfamily	LTR	HUERS-P3-int	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LTR' belong to?	[ "ERVL", "ERV1", "Gypsy", "Alu" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LINE' belong to?	[ "L1", "ERVK", "Alu", "ERVL" ]	L1	Class	Family	LINE	L1	[ "LINEs are transposable elements found in various eukaryotes such as plants, protists, insects, and mammals. Their transposition is usually difficult to study, particularly in humans, where some diseases have been shown to result from LINE insertion mutations. This is due to the fact that most copies of any particu...
Which family does the subfamily 'MER102a' belong to?	[ "Gypsy", "L1", "ERVL-MaLR", "hAT-Charlie" ]	hAT-Charlie	Subfamily	Family	MER102a	hAT-Charlie	[ "We have discovered a family of short interspersed repetitive elements (SINEs) that are present in the genomes of fish, amphibian and primates. The family of the SINEs, designated mermaid, is distinctive in each species except for a conserved region of approximately 80 bp. Some members of the mermaid family were fo...
Which class belongs to the family 'TcMar-Tigger'?	[ "LINE", "LTR", "DNA", "SINE" ]	DNA	Family	Class	TcMar-Tigger	DNA	[ "Tc3 of Caenorhabditis elegans is one of the founding members of the Tc1 family which includes DNA transposons in vertebrates, insects, nematodes and fungi. It is one of the best characterized eukaryotic transposons in terms of structure and transposition mechanism. A Tc3-like transposon MsqTc3 has been recently de...
Which class belongs to the family 'ERVK'?	[ "LINE", "SINE", "LTR", "DNA" ]	LTR	Family	Class	ERVK	LTR	[ "The human genome harbors numerous distinct families of so-called human endogenous retroviruses (HERV) which are remnants of exogenous retroviruses that entered the germ line millions of years ago. We describe here the hitherto little-characterized betaretrovirus HERV-K(HML-5) family (named HERVK22 in Repbase) in g...
Which class belongs to the subfamily 'MER66C'?	[ "SINE", "LTR", "DNA", "LINE" ]	LTR	Subfamily	Class	MER66C	LTR	[ "A second member of the divergent mori subfamily of mariner transposons, Bmmar6, is described from the silkworm moth Bombyx mori genome. A confident consensus sequence for Bmmar6 was obtained from a single genomic copy, 17 EST sequences, and the direct sequencing of a 'family' sequence from an amplification of all ...
Which subfamily does the class 'LTR' belong to?	[ "LTR36", "LTR9C", "MER74A", "HERV15-int" ]	MER74A	Class	Subfamily	LTR	MER74A	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LTR' belong to?	[ "TcMar-Tigger", "DNA", "ERV1", "ERVL-MaLR" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the subfamily 'Zaphod2'?	[ "LTR", "DNA", "LINE", "SINE" ]	DNA	Subfamily	Class	Zaphod2	DNA	[ "A novel family of miniature transposable elements, named Zaba, was identified in pea (Pisum sativum) and subsequently also in other legume species using computer analysis of their DNA sequences. Zaba elements are 141-190 bp long, generate 10-bp target site duplications, and their terminal inverted repeats make up ...
Which class belongs to the family 'hAT-Charlie'?	[ "LINE", "SINE", "DNA", "LTR" ]	DNA	Family	Class	hAT-Charlie	DNA	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which family does the subfamily 'Charlie13b' belong to?	[ "hAT-Tip100", "TcMar-Tigger", "Gypsy", "hAT-Charlie" ]	hAT-Charlie	Subfamily	Family	Charlie13b	hAT-Charlie	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily does the class 'LTR' belong to?	[ "LTR4", "LTR41C", "L1P4d", "MER91C" ]	LTR4	Class	Subfamily	LTR	LTR4	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the subfamily 'MER91A'?	[ "DNA", "SINE", "LTR", "LINE" ]	DNA	Subfamily	Class	MER91A	DNA	[ "Mariner-like elements (MLE) are members from class II of transposable elements also known as DNA transposons. These elements have a wide distribution among different groups of organisms, including insects, which can be explained by horizontal and vertical gene-transfer. MLE families have been described in tephriti...
Which subfamily does the class 'DNA' belong to?	[ "MER102a", "LTR41C", "MamGypsy2-LTR", "LTR60" ]	MER102a	Class	Subfamily	DNA	MER102a	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily is in the family 'ERV1'?	[ "LTR36", "LTR1B1", "L1P4c", "LTR75B" ]	LTR36	Family	Subfamily	ERV1	LTR36	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which subfamily is in the family 'hAT-Tip100'?	[ "LTR41", "HERVK-int", "MER119", "MER96" ]	MER96	Family	Subfamily	hAT-Tip100	MER96	[ "Tip100 is an Ac-like transposable element that belongs to the hAT superfamily. First discovered in Ipomoea purpurea (common morning glory), it was classified as an autonomous element capable of movement within the genome. As Tip100 data were already available in databases, the sequences of related elements in ten ...
Which family does the subfamily 'MER20B' belong to?	[ "ERVK", "DNA", "hAT-Charlie", "ERVL" ]	hAT-Charlie	Subfamily	Family	MER20B	hAT-Charlie	[ "We report a new medium reiteration frequency repeat MER53 present in human and mammalian genomes. A 189 bp MER53 consensus sequence has been reconstructed based on the computer analysis of GenBank sequences. TA target site duplication and terminal inverted repeats indicate that the MER53 repeat is a non-autonomous...
Which subfamily does the class 'LINE' belong to?	[ "L1P4d", "Tigger16a", "MLT1L-int", "LTR35" ]	L1P4d	Class	Subfamily	LINE	L1P4d	[ "LINEs are transposable elements found in various eukaryotes such as plants, protists, insects, and mammals. Their transposition is usually difficult to study, particularly in humans, where some diseases have been shown to result from LINE insertion mutations. This is due to the fact that most copies of any particu...
Which class belongs to the subfamily 'LTR9C'?	[ "SINE", "DNA", "LINE", "LTR" ]	LTR	Subfamily	Class	LTR9C	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the subfamily 'MamRep4096'?	[ "LTR", "SINE", "LINE", "DNA" ]	DNA	Subfamily	Class	MamRep4096	DNA	[ "Some mobile genetic elements target the lagging strand template during DNA replication. Bacterial examples are insertion sequences IS608 and ISDra2 (IS200/IS605 family members). They use obligatory single-stranded circular DNA intermediates for excision and insertion and encode a transposase, TnpAIS200, which reco...
Which subfamily does the class 'LTR' belong to?	[ "LTR35", "LTR28B", "Charlie17b", "MER20" ]	LTR35	Class	Subfamily	LTR	LTR35	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LINE' belong to?	[ "Gypsy", "ERVK", "L1", "TcMar-Tigger" ]	L1	Class	Family	LINE	L1	[ "LINEs are transposable elements found in various eukaryotes such as plants, protists, insects, and mammals. Their transposition is usually difficult to study, particularly in humans, where some diseases have been shown to result from LINE insertion mutations. This is due to the fact that most copies of any particu...
Which family does the subfamily 'ERVL47-int' belong to?	[ "ERV1", "ERVL", "ERVL-MaLR", "L1" ]	ERVL	Subfamily	Family	ERVL47-int	ERVL	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the subfamily 'LTR16C' belong to?	[ "ERVK", "ERVL", "hAT-Charlie", "DNA" ]	ERVL	Subfamily	Family	LTR16C	ERVL	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'DNA' belong to?	[ "ERVL-MaLR", "ERVL", "ERV1", "hAT-Charlie" ]	hAT-Charlie	Class	Family	DNA	hAT-Charlie	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which class belongs to the family 'L1'?	[ "SINE", "LINE", "LTR", "DNA" ]	LINE	Family	Class	L1	LINE	[ "LINE-1 (L1) is a mammalian family of highly repeated DNA sequences that are members of a class of transposable elements whose movement involves an RNA intermediate. Both structural and evolutionary data indicate that the L1 family consists of a small number of active transposable elements interspersed with a large...
Which class belongs to the subfamily 'MER119'?	[ "SINE", "DNA", "LTR", "LINE" ]	DNA	Subfamily	Class	MER119	DNA	[ "Mariner-like elements (MLE) are Class II transposable elements that are very widespread among eukaryotic genomes. One MLE belonging to the mauritiana subfamily, named Botmar1, has been identified in the genome of the bumble bee, Bombus terrestris. gDNA hybridization with the Botmar1 transposase ORF revealed that a...
Which class belongs to the subfamily 'MER102a'?	[ "LINE", "SINE", "DNA", "LTR" ]	DNA	Subfamily	Class	MER102a	DNA	[ "Mariner-like elements (MLE) are members from class II of transposable elements also known as DNA transposons. These elements have a wide distribution among different groups of organisms, including insects, which can be explained by horizontal and vertical gene-transfer. MLE families have been described in tephriti...
Which class belongs to the family 'ERV1'?	[ "LINE", "SINE", "LTR", "DNA" ]	LTR	Family	Class	ERV1	LTR	[ "Human endogenous retroviruses (HERVs) represent the inheritance of ancient germ-line cell infections by exogenous retroviruses and the subsequent transmission of the integrated proviruses to the descendants. ERVs have the same internal structure as exogenous retroviruses. While no replication-competent HERVs have ...
Which family does the class 'SINE' belong to?	[ "hAT-Charlie", "hAT-Tip100", "Alu", "ERV1" ]	Alu	Class	Family	SINE	Alu	[ "SINEs (short interspersed elements) are transposable elements that typically originate independently in each taxonomic clade (order/family). However, some SINE families share a highly similar central sequence and are thus categorized as a SINE superfamily. Although only four SINE superfamilies (CORE-SINEs, V-SINEs...
Which family does the class 'DNA' belong to?	[ "ERVL", "hAT-Charlie", "Gypsy", "ERVK" ]	hAT-Charlie	Class	Family	DNA	hAT-Charlie	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which class belongs to the subfamily 'MER74A'?	[ "LTR", "DNA", "LINE", "SINE" ]	LTR	Subfamily	Class	MER74A	LTR	[ "Mariner-like elements (MLE) are members from class II of transposable elements also known as DNA transposons. These elements have a wide distribution among different groups of organisms, including insects, which can be explained by horizontal and vertical gene-transfer. MLE families have been described in tephriti...
Which class belongs to the subfamily 'MER90'?	[ "LTR", "LINE", "DNA", "SINE" ]	LTR	Subfamily	Class	MER90	LTR	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily is in the family 'hAT-Charlie'?	[ "Tigger16a", "LTR35", "MER102b", "HUERS-P2-int" ]	MER102b	Family	Subfamily	hAT-Charlie	MER102b	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which class belongs to the family 'ERVL-MaLR'?	[ "LTR", "SINE", "DNA", "LINE" ]	LTR	Family	Class	ERVL-MaLR	LTR	[ "Although the ERVL-mammalian-apparent LTR retrotransposons (MaLRs) are the fourth largest family of transposable elements in the human genome, their evolutionary history and relationship have not been thoroughly studied. In this study, through RepeatMasker annotations of some representative species and construction...
Which subfamily is in the family 'ERV1'?	[ "LTR1A1", "HERVL18-int", "MER102b", "LTR38A1" ]	LTR38A1	Family	Subfamily	ERV1	LTR38A1	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the subfamily 'L1PA15-16' belong to?	[ "L1", "ERVL-MaLR", "hAT-Tip100", "Gypsy" ]	L1	Subfamily	Family	L1PA15-16	L1	[ "LINE-1 (L1) is a mammalian family of highly repeated DNA sequences that are members of a class of transposable elements whose movement involves an RNA intermediate. Both structural and evolutionary data indicate that the L1 family consists of a small number of active transposable elements interspersed with a large...
Which class belongs to the subfamily 'LTR1A1'?	[ "DNA", "LTR", "SINE", "LINE" ]	LTR	Subfamily	Class	LTR1A1	LTR	[ "LINE-1 (L1) is a mammalian family of highly repeated DNA sequences that are members of a class of transposable elements whose movement involves an RNA intermediate. Both structural and evolutionary data indicate that the L1 family consists of a small number of active transposable elements interspersed with a large...
Which class belongs to the family 'ERVL'?	[ "LTR", "DNA", "LINE", "SINE" ]	LTR	Family	Class	ERVL	LTR	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which subfamily is in the family 'ERV1'?	[ "LTR16C", "MER91B", "LTR1B1", "MER50C" ]	MER50C	Family	Subfamily	ERV1	MER50C	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the class 'LTR' belong to?	[ "ERV1", "L1", "ERVK", "Gypsy" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which class belongs to the subfamily 'LTR36'?	[ "LINE", "SINE", "DNA", "LTR" ]	LTR	Subfamily	Class	LTR36	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'LTR35' belong to?	[ "hAT-Tip100", "Gypsy", "ERV1", "TcMar-Tigger" ]	ERV1	Subfamily	Family	LTR35	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'TcMar-Tigger'?	[ "L1PA15-16", "LTR1B1", "MER90", "MERX" ]	MERX	Family	Subfamily	TcMar-Tigger	MERX	[ "The T2 family of miniature inverted-repeat transposable elements (T2-MITE) is a prevalent MITE family found in both Xenopus(Silurana) tropicalis and X. laevis. Some subfamilies, particularly T2-A1 and T2-C, may have originated prior to the diversification of the 2 Xenopus lineages and currently include active memb...
Which class belongs to the subfamily 'L1M3f'?	[ "LINE", "LTR", "DNA", "SINE" ]	LINE	Subfamily	Class	L1M3f	LINE	[ "LINE-1 (L1) is a mammalian family of highly repeated DNA sequences that are members of a class of transposable elements whose movement involves an RNA intermediate. Both structural and evolutionary data indicate that the L1 family consists of a small number of active transposable elements interspersed with a large...
Which subfamily does the class 'LINE' belong to?	[ "L1P4c", "MER76-int", "LTR22B2", "LTR35" ]	L1P4c	Class	Subfamily	LINE	L1P4c	[ "LINEs are transposable elements found in various eukaryotes such as plants, protists, insects, and mammals. Their transposition is usually difficult to study, particularly in humans, where some diseases have been shown to result from LINE insertion mutations. This is due to the fact that most copies of any particu...
Which subfamily is in the family 'ERV1'?	[ "LTR60B", "LTR1A1", "MLT1K-int", "MER91C" ]	LTR1A1	Family	Subfamily	ERV1	LTR1A1	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which class belongs to the subfamily 'LTR75B'?	[ "DNA", "LTR", "LINE", "SINE" ]	LTR	Subfamily	Class	LTR75B	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'L1P4d' belong to?	[ "hAT-Tip100", "L1", "Alu", "ERVL" ]	L1	Subfamily	Family	L1P4d	L1	[ "LINE-1 (L1) is a mammalian family of highly repeated DNA sequences that are members of a class of transposable elements whose movement involves an RNA intermediate. Both structural and evolutionary data indicate that the L1 family consists of a small number of active transposable elements interspersed with a large...
Which class belongs to the subfamily 'LTR9C'?	[ "LINE", "LTR", "SINE", "DNA" ]	LTR	Subfamily	Class	LTR9C	LTR	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'DNA' belong to?	[ "TcMar-Tigger", "ERVL-MaLR", "ERVL", "L1" ]	TcMar-Tigger	Class	Family	DNA	TcMar-Tigger	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily does the class 'LTR' belong to?	[ "PRIMAX-int", "LTR13A", "HERVL40-int", "MLT1L-int" ]	HERVL40-int	Class	Subfamily	LTR	HERVL40-int	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'DNA' belong to?	[ "LTR10F", "ORSL-2a", "HERVK11D-int", "LTR38A1" ]	ORSL-2a	Class	Subfamily	DNA	ORSL-2a	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...
Which subfamily is in the family 'hAT-Charlie'?	[ "LTR41", "MER102a", "MERX", "LTR4" ]	MER102a	Family	Subfamily	hAT-Charlie	MER102a	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which subfamily does the class 'LTR' belong to?	[ "LTR35A", "MamGypsy2-LTR", "LTR1", "MER90" ]	MER90	Class	Subfamily	LTR	MER90	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'LTR' belong to?	[ "L1M3f", "MER91B", "LTR41B", "L1P4c" ]	LTR41B	Class	Subfamily	LTR	LTR41B	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'LTR' belong to?	[ "MER76-int", "LTR35", "LTR28C", "HERVFH21-int" ]	HERVFH21-int	Class	Subfamily	LTR	HERVFH21-int	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'hAT-Charlie'?	[ "MamRep4096", "MERX", "MER20", "MER102b" ]	MER20	Family	Subfamily	hAT-Charlie	MER20	[ "The hAT family is a group of transposable elements of the terminal inverted repeat class, which includes Ac of maize, hobo of Drosophila and Tam3 of Antirrhinum (snapdragon). All the members of this family so far examined are known to comprise complete and defective copies, with a good correspondence to autonomous...
Which family does the class 'LTR' belong to?	[ "hAT-Tip100", "Alu", "TcMar-Tigger", "ERVK" ]	ERVK	Class	Family	LTR	ERVK	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily is in the family 'ERV1'?	[ "HUERS-P2-int", "HERVI-int", "MLT1K-int", "HERVH48-int" ]	HERVH48-int	Family	Subfamily	ERV1	HERVH48-int	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which class belongs to the subfamily 'PRIMAX-int'?	[ "LINE", "LTR", "SINE", "DNA" ]	LTR	Subfamily	Class	PRIMAX-int	LTR	[ "Platy-1 retroposons are short interspersed elements (SINEs) unique to platyrrhine primates. Discovered in the common marmoset (Callithrix jacchus) genome in 2016, these 100 bp mobile element insertions (MEIs) appeared to be novel drivers of platyrrhine evolution, with over 2200 full-length members across 62 differ...
Which family does the subfamily 'MER91B' belong to?	[ "L1", "Gypsy", "ERVK", "hAT-Tip100" ]	hAT-Tip100	Subfamily	Family	MER91B	hAT-Tip100	[ "Mariner-like elements (MLE) are Class II transposable elements that are very widespread among eukaryotic genomes. One MLE belonging to the mauritiana subfamily, named Botmar1, has been identified in the genome of the bumble bee, Bombus terrestris. gDNA hybridization with the Botmar1 transposase ORF revealed that a...
Which class belongs to the family 'ERVL'?	[ "SINE", "LINE", "DNA", "LTR" ]	LTR	Family	Class	ERVL	LTR	[ "Endogenous retroviruses (ERVs), which blur the boundary between virus and transposable element, are genetic material derived from retroviruses and have important implications for evolution. This study examines the diversity and evolution of human endogenous retroviruses (HERVs) of the HERVL family, which has long ...
Which family does the subfamily 'LTR1B1' belong to?	[ "ERVL-MaLR", "TcMar-Tigger", "ERVL", "ERV1" ]	ERV1	Subfamily	Family	LTR1B1	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the subfamily 'MER20B' belong to?	[ "hAT-Charlie", "ERVL", "Alu", "ERVK" ]	hAT-Charlie	Subfamily	Family	MER20B	hAT-Charlie	[ "We report a new medium reiteration frequency repeat MER53 present in human and mammalian genomes. A 189 bp MER53 consensus sequence has been reconstructed based on the computer analysis of GenBank sequences. TA target site duplication and terminal inverted repeats indicate that the MER53 repeat is a non-autonomous...
Which subfamily does the class 'LTR' belong to?	[ "MamTip3", "LTR1A2", "HERVK14C-int", "MER66C" ]	LTR1A2	Class	Subfamily	LTR	LTR1A2	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'LTR' belong to?	[ "LTR38A1", "LTR41B", "LTR9C", "LTR36" ]	LTR38A1	Class	Subfamily	LTR	LTR38A1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which family does the class 'LTR' belong to?	[ "hAT-Tip100", "hAT-Charlie", "L1", "ERV1" ]	ERV1	Class	Family	LTR	ERV1	[ "Long terminal repeat (LTR) retrotransposons are transposable elements flanked by 5'/3' LTRs. They have a structure similar to endogenous retroviruses, but they lack the envelope (env) gene making them non-infectious. Long terminal repeats are motif-rich sequences and can act as bidirectional promoters or enhancers...
Which subfamily does the class 'DNA' belong to?	[ "HERVIP10FH-int", "MER54B", "MER76-int", "MER91A" ]	MER91A	Class	Subfamily	DNA	MER91A	[ "The higher levels of the classification of transposable elements (TEs) from Classes to Superfamilies or Families, is regularly updated, but the lower levels (below the Family) have received little investigation. In particular, this applies to the Families that include a large number of copies. In this article we p...

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